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Ligand clusters for UniProt code Q45458

Ligand clusters for Q45458: DNA polymerase I from Geobacillus stearothermophilus

Top 6 (of 12) ligand clusters
Cluster 1.
3 ligand types
6 ligands
Cluster 2.
1 ligand type
5 ligands
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
3 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
4 ligands
Representative protein: 2hhqA  
JSmol
 

Structures

PDB   Schematic diagram
2hhqA    
2hhtA    
2hhsA    
2hw3A    
2hvhA    

 

 Cluster 1 contains 3 ligand types

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Ligand Description

_Mn
 
1. Metal: _MN × 1
PDB code: 2hvh(A).


 
2. Ligand: DCT × 1
2',3'-Dideoxycytidine 5'-Triphosphate
PDB code: 2hvh(A).


 
3. Ligand: SO4 × 4
Sulfate ion
PDB codes: 2hhq(A), 2hhs(A), 2hht(A), 2hw3(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: GLC-FRU × 5
GLC=Alpha-D-Glucopyranose, FRU=Beta-D-Fructofuranose.
PDB codes: 2hhq(A), 2hhs(A), 2hht(A), 2hvh(A), 2hw3(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GLC-FRU × 2
GLC=Alpha-D-Glucopyranose, FRU=Beta-D-Fructofuranose.
PDB codes: 2hhq(A), 2hw3(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GLC-FRU × 3
GLC=Alpha-D-Glucopyranose, FRU=Beta-D-Fructofuranose.
PDB codes: 2hhq(A), 2hhs(A), 2hht(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GLC-FRU × 1
GLC=Alpha-D-Glucopyranose, FRU=Beta-D-Fructofuranose.
PDB code: 2hvh(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 4
Sulfate ion
PDB codes: 2hhq(A), 2hhs(A), 2hht(A), 2hw3(A).

 

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