Ligand clusters for UniProt code Q2KDX6

Ligand clusters for Q2KDX6: Probable sugar kinase protein from Rhizobium etli (strain CFN 42 / ATCC 51251)

		Top 6 (of 13) ligand clusters Cluster 1. 7 ligand types 7 ligands Cluster 2. 8 ligand types 39 ligands Cluster 3. 5 ligand types 5 ligands Cluster 4. 5 ligand types 6 ligands Cluster 5. 1 ligand type 19 ligands Cluster 6. 1 ligand type 1 ligand
Representative protein: 4k8pA

Structures

PDB		Schematic diagram
4k8pA
4k8kA
4lbgA
4lbxA
4e3aA
		more ...

Cluster 1 contains 7 ligand types

Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file. Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: ADN × 1 adenosine Adenosine PDB code: 4lbg(A).
		2. Ligand: 1QB × 1 N-(4,7-Dihydro-1h-Inden-6-Yl)acetamide PDB code: 4kad(A).
		3. Ligand: ADP × 1 Adenosine-5'-Diphosphate PDB code: 4k8c(A).
		4. Ligand: CTN × 1 4-Amino-1-Beta-D-Ribofuranosyl-2(1h)-Pyrimidinone PDB code: 4lbx(A).
		5. Ligand: DZY × 1 (2,5-Dimethyl-1,3-Thiazol-4-Yl)acetic acid PDB code: 4kan(A).
		6. Ligand: GMP × 1 Guanosine PDB code: 4lc4(A).
		7. Ligand: THM × 1 Thymidine PDB code: 4lca(A).

Cluster 2 contains 8 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: DMS × 30 dimethyl sulfoxide Dimethyl sulfoxide PDB codes: 4jks(A), 4jku(A), 4k8c(A), 4k8p(A), 4k8t(A), 4k93(A), 4k9c(A), 4k9i(A), 4kad(A), 4kah(A), 4kal(A), 4kbe(A), 4lbg(A), 4lbx(A), 4lc4(A), 4lca(A),
		2. Ligand: 1PK × 2 1h-Perimidin-2-Amine PDB codes: 4k8k(A),
		3. Ligand: 1Q8 × 2 N-(Hydroxymethyl)benzamide PDB codes: 4k93(A), 4k9c(A).
		4. Ligand: 12M × 1 (2-Ethylphenyl)methanol PDB code: 4k8p(A).
		5. Ligand: 1PJ × 1 1-(4-Methoxyphenyl)cyclopropanecarboxylic acid PDB code: 4k8k(A).
		6. Ligand: BYZ × 1 4-Bromo-1h-Pyrazole PDB code: 4kah(A).
		7. Ligand: DZY × 1 (2,5-Dimethyl-1,3-Thiazol-4-Yl)acetic acid PDB code: 4kan(A).
		8. Ligand: E34 × 1 Ethyl 3,4-Diaminobenzoate PDB code: 4k8t(A).

Cluster 3 contains 5 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: 1Q8 × 1 N-(Hydroxymethyl)benzamide PDB code: 4k93(A).
		2. Ligand: C29 × 1 4-Methyl-3,4-Dihydro-2h-1,4-Benzoxazine-7-Carboxylic acid PDB code: 4k9c(A).
		3. Ligand: NRH × 1 Norharmane PDB code: 4k9i(A).
		4. Ligand: Q3C × 1 Quinoline-3-Carboxylic acid PDB code: 4kal(A).
		5. Ligand: QNC × 1 Quinoline-2-Carboxylic acid PDB code: 4jku(A).

Cluster 4 contains 5 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: 1Q8 × 2 N-(Hydroxymethyl)benzamide PDB codes: 4k93(A), 4k9c(A).
		2. Ligand: 12M × 1 (2-Ethylphenyl)methanol PDB code: 4k8p(A).
		3. Ligand: 1PK × 1 1h-Perimidin-2-Amine PDB code: 4k8k(A).
		4. Ligand: BYZ × 1 4-Bromo-1h-Pyrazole PDB code: 4kah(A).
		5. Ligand: DZY × 1 (2,5-Dimethyl-1,3-Thiazol-4-Yl)acetic acid PDB code: 4kan(A).

Cluster 5 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: ADN × 19 adenosine Adenosine PDB codes: 4e3a(A), 4jks(A), 4jku(A), 4k8c(A), 4k8k(A), 4k8p(A), 4k8t(A), 4k93(A), 4k9c(A), 4k9i(A), 4kad(A), 4kah(A), 4kal(A), 4kan(A), 4kbe(A), 4lbg(A), 4lbx(A), 4lc4(A), 4lca(A).

Cluster 6 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: BZE × 1 6-Phenyl-1,3,5-Triazine-2,4-Diamine PDB code: 4kbe(A).