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EBI
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Structure Databases
PDBsum
Ligand clusters for UniProt code P56216
Ligand clusters for P56216: Vanillyl-alcohol oxidase from Penicillium simplicissimum
2 ligand clusters
Cluster 1.
9 ligand types
31 ligands
Cluster 2.
1 ligand type
1 ligand
Representative protein: 1ahuA
Structures
PDB
Schematic diagram
1ahu
A
1vao
A
1ahz
A
1ahv
A
1e0y
A
more ...
Cluster 1 contains 9 ligand types
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Ligand
Description
1. Ligand:
FAD × 15
flavin adenine dinucleotide
Flavin-Adenine dinucleotide
PDB codes:
1ahv
(A),
1ahz
(A),
1dzn
(A),
1e0y
(A),
1e8g
(A),
1qlt
(A),
1qlu
(A),
1vao
(A),
1w1j
(A),
1w1k
(A),
1w1l
(A),
1w1m
(A),
2vao
(A),
5mxj
(A),
5mxu
(A).
2. Ligand:
EUG × 7
isoeugenol
2-Methoxy-4-Vinyl-Phenol
PDB codes:
1dzn
(A),
1qlu
(A),
1w1j
(A),
1w1k
(A),
1w1l
(A),
1w1m
(A),
2vao
(A).
3. Ligand:
FAA × 1
N5-(4-Hydroxybenzyl)flavin-Adenine dinucleotide
PDB code:
1ahu
(A).
4. Ligand:
FCR × 1
Alpha,Alpha,Alpha-Trifluoro-P-Cresol
PDB code:
1e8g
(A).
5. Ligand:
NCR × 1
2-Nitro-P-Cresol
PDB code:
1ahv
(A).
6. Ligand:
ADP × 1
Adenosine-5'-Diphosphate
PDB code:
1e8h
(A).
7. Ligand:
EPT × 1
Heptanyl-P-Phenol
PDB code:
1ahz
(A).
8. Ligand:
ACT × 2
Acetate ion
PDB codes:
1qlt
(A),
1vao
(A).
_Cl
9. Metal:
_CL × 2
PDB codes:
1ahz
(A),
1vao
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
5mxj
(A).