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Ligand clusters for UniProt code P49759
Ligand clusters for P49759: Dual specificity protein kinase CLK1 from Homo sapiens
Top 6 (of 34) ligand clusters
Cluster 1.
34 ligand types
48 ligands
Cluster 2.
5 ligand types
7 ligands
Cluster 3.
3 ligand types
3 ligands
Cluster 4.
2 ligand types
4 ligands
Cluster 5.
2 ligand types
2 ligands
Cluster 6.
2 ligand types
6 ligands
Representative protein: 6ytdA
Structures
PDB
Schematic diagram
6ytd
A
6zln
A
6fyo
A
7ak3
A
6yti
A
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Cluster 1 contains 34 ligand types (of which only 20 are listed. Click
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Ligand
Description
1. Ligand:
GOL × 5
glycerin
Glycerol
PDB codes:
5j1w
(A),
6i5k
(A),
6i5l
(A).
2. Ligand:
DBQ × 1
Debromohymenialdisine
PDB code:
1z57
(A).
3. Ligand:
V25 × 1
Ethyl 3-[(E)-2-Amino-1-Cyanoethenyl]-6,7- Dichloro-1-Methyl-1h-Indole-2-Carboxylate
PDB code:
2vag
(A).
4. Ligand:
EDO × 6
1,2-Ethanediol
PDB codes:
6ft8
(A),
6i5h
(A),
6i5i
(A),
6z50
(A),
6zln
(A).
5. Ligand:
V25 × 2
Ethyl 3-[(E)-2-Amino-1-Cyanoethenyl]-6,7-Dichloro-1- Methyl-1h-Indole-2-Carboxylate
PDB codes:
6qty
(A),
6tw2
(E).
6. Ligand:
6FB × 2
Pyrido[3,4-G]quinazolin-2-Amine
PDB codes:
5j1w
(A),
7. Ligand:
6FD × 2
Pyrido[3,4-G]quinazoline-2,10-Diamine
PDB codes:
5j1v
(A),
8. Ligand:
EAE × 2
(1~{z})-1-(3-Ethyl-5-Methoxy-1,3-Benzothiazol-2- Ylidene)propan-2-One
PDB codes:
6ytd
(A),
6yte
(C).
9. Ligand:
JUW × 2
4-(1-Methylindol-3-Yl)pyrimidin-2-Amine
PDB codes:
6r8j
(A),
10. Ligand:
3NG × 1
5-[(3-Chlorophenyl)amino]benzo[c][2,6]naphthyridine-8- Carboxylic acid
PDB code:
6khd
(A).
11. Ligand:
5ID × 1
(2r,3r,4s,5r)-2-(4-Amino-5-Iodo-7h-Pyrrolo[2,3- D]pyrimidin-7-Yl)-5-(Hydroxymethyl)tetrahydrofuran-
3, 4-Diol
PDB code:
6g33
(A).
12. Ligand:
7A7 × 1
Methyl 9-[(2-Fluoranyl-4-Methoxy-Phenyl)amino]-[1, 3]thiazolo[5,4-F]quinazoline-2-Carboximidate
PDB code:
6yti
(A).
13. Ligand:
E6T × 1
3-(3-Hydroxyphenyl)-1~{h}-Pyrrolo[3,4-G]indol-8-One
PDB code:
6ft8
(A).
14. Ligand:
E6W × 1
2-Bromanyl-3-Phenyl-1~{h}-Pyrrolo[3,4-G]indol-8-One
PDB code:
6ft9
(A).
15. Ligand:
EAQ × 1
6-~{Tert}-Butyl-~{N}-[6-(1~{h}-Pyrazol-4-Yl)-1~{h}- Imidazo[1,2-A]pyridin-2-Yl]pyridine-3-
Carboxamide
PDB code:
6fyo
(A).
16. Ligand:
FG9 × 1
~{N}2-(3-Morpholin-4-Ylpropyl)pyrido[3,4-G]quinazoline- 2,10-Diamine
PDB code:
6q8k
(A).
17. Ligand:
H3E × 1
5-(1-Methylpyrazol-4-Yl)-3-[1-(Phenylmethyl)pyrazol-4- Yl]furo[3,2-B]pyridine
PDB code:
6i5i
(A).
18. Ligand:
H3H × 1
5-(1-Methylpyrazol-4-Yl)-3-(3-Propan-2-Yloxyphenyl) furo[3,2-B]pyridine
PDB code:
6i5k
(A).
19. Ligand:
H3N × 1
5-(1-Methylpyrazol-4-Yl)-3-(3-Phenoxyphenyl)furo[3,2- B]pyridine
PDB code:
6i5h
(A).
20. Ligand:
H3Q × 1
3-(3-Cyclobutylphenyl)-5-(1-Methylpyrazol-4-Yl)furo[3, 2-B]pyridine
PDB code:
6i5l
(A).
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Cluster 2 contains 5 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
5j1w
(A).
2. Ligand:
EDO × 3
1,2-Ethanediol
PDB codes:
6i5i
(A),
6yti
(A),
6z50
(A).
3. Ligand:
6FB × 1
Pyrido[3,4-G]quinazolin-2-Amine
PDB code:
5j1w
(C).
4. Ligand:
KHC × 1
(4~{s})-7,8-Bis(chloranyl)-9-Methyl-1-Oxidanylidene- Spiro[2,4-Dihydropyrido[3,4-B]indole-3,4'-
Piperidine]- 4-Carbonitrile
PDB code:
6ytg
(A).
5. Ligand:
PO4 × 1
Phosphate ion
PDB code:
5j1w
(C).
Cluster 3 contains 3 ligand types
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
6z50
(A).
2. Ligand:
PO4 × 1
Phosphate ion
PDB code:
6z4z
(A).
3. Ligand:
SO4 × 1
Sulfate ion
PDB code:
6fyo
(A).
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
5j1v
(A),
5j1w
(A).
2. Ligand:
PO4 × 2
Phosphate ion
PDB codes:
6ft9
(A),
6z4z
(A).
Cluster 5 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
6i5k
(A).
2. Ligand:
PO4 × 1
Phosphate ion
PDB code:
6i5l
(A).
Cluster 6 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
5j1w
(A).
2. Ligand:
EDO × 5
1,2-Ethanediol
PDB codes:
6i5h
(A),
6i5i
(A),
6z50
(A).