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Ligand clusters for UniProt code P40394

Ligand clusters for P40394: All-trans-retinol dehydrogenase [NAD(+)] ADH7 from Homo sapiens

Top 6 (of 7) ligand clusters
Cluster 1.
3 ligand types
15 ligands
Cluster 2.
1 ligand type
3 ligands
Cluster 3.
2 ligand types
3 ligands
Cluster 4.
2 ligand types
5 ligands
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 1agnA  
JSmol
 

Structures

PDB   Schematic diagram
1agnA    
1d1tA    
1d1sA    

 

 Cluster 1 contains 3 ligand types

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Ligand Description


 
1. Ligand: NAD × 3
Nicotinamide-Adenine-Dinucleotide
PDB codes: 1agn(A), 1d1s(A), 1d1t(A).

_Zn
 
2. Metal: _ZN × 6
PDB codes: 1agn(A), 1d1s(A), 1d1t(A),


 
3. Ligand: ACT × 6
Acetate ion
PDB codes: 1agn(A), 1d1s(A), 1d1t(A),

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: NAD × 3
Nicotinamide-Adenine-Dinucleotide
PDB codes: 1agn(A), 1d1s(A), 1d1t(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description

_Zn
 
1. Metal: _ZN × 2
PDB codes: 1d1s(A), 1d1t(A).


 
2. Ligand: ACT × 1
Acetate ion
PDB code: 1agn(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description

_Zn
 
1. Metal: _ZN × 2
PDB codes: 1d1s(A), 1d1t(A).


 
2. Ligand: ACT × 3
Acetate ion
PDB codes: 1d1s(A), 1d1t(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: CAC × 2
Cacodylate ion
PDB codes: 1d1s(A), 1d1t(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: CAC × 2
Cacodylate ion
PDB codes: 1d1s(A), 1d1t(A).

 

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