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EBI
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PDBsum
Ligand clusters for UniProt code P37957
Ligand clusters for P37957: Lipase EstA from Bacillus subtilis (strain 168)
Top 6 (of 13) ligand clusters
Cluster 1.
7 ligand types
19 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
2 ligand types
3 ligands
Cluster 4.
2 ligand types
3 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3qzuA
Structures
PDB
Schematic diagram
3qzu
A
1t2n
A
1t4m
A
5ct4
A
1r4z
A
more ...
Cluster 1 contains 7 ligand types
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Ligand
Description
__K
1. Metal:
__K × 2
PDB codes:
1t2n
(A),
1t4m
(A).
2. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1isp
(A).
3. Ligand:
RIL × 1
[(4r)-2,2-Dimethyl-1,3-Dioxolan-4-Yl]methyl hydrogen hex-5-Enylphosphonate
PDB code:
1r4z
(A).
4. Ligand:
SIL × 1
[(4s)-2,2-Dimethyl-1,3-Dioxolan-4-Yl]methyl hydrogen hex-5-Enylphosphonate
PDB code:
1r50
(A).
_Cl
5. Metal:
_CL × 7
PDB codes:
3qzu
(A),
5ct4
(A),
5ct5
(A),
5ct9
(A),
5cta
(A),
5cur
(A),
6. Ligand:
BM0 × 5
1-Butyl-3-Methyl-1h-Imidazol-3-Ium
PDB codes:
5ct4
(A),
5ct5
(A),
5ct6
(A),
5cur
(A).
7. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
5cri
(A),
5ct8
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
BM0 × 1
1-Butyl-3-Methyl-1h-Imidazol-3-Ium
PDB code:
5ct6
(A).
2. Ligand:
SO4 × 1
Sulfate ion
PDB code:
5cri
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
3qzu
(A).
2. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
5cri
(A),
5ct5
(A).
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
3qzu
(A).
2. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
5cri
(A),
5ct4
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
BM0 × 1
1-Butyl-3-Methyl-1h-Imidazol-3-Ium
PDB code:
5ct4
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
BM0 × 1
1-Butyl-3-Methyl-1h-Imidazol-3-Ium
PDB code:
5ct6
(A).