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PDBsum
Ligand clusters for UniProt code P35354
Ligand clusters for P35354: Prostaglandin G/H synthase 2 from Homo sapiens
Top 6 (of 21) ligand clusters
Cluster 1.
3 ligand types
7 ligands
Cluster 2.
7 ligand types
9 ligands
Cluster 3.
2 ligand types
7 ligands
Cluster 4.
1 ligand type
7 ligands
Cluster 5.
2 ligand types
7 ligands
Cluster 6.
2 ligand types
3 ligands
Representative protein: 5f1aA
Structures
PDB
Schematic diagram
5f1a
A
5ikv
A
5kir
A
5ikt
A
5ikr
A
more ...
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
NAG-NAG-MAN × 5
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
MAN
=Alpha-D-Mannopyranose.
PDB codes:
5f1a
(A),
5ikr
(A),
5ikt
(A),
5ikv
(A),
5kir
(A).
2. Ligand:
NAG-NAG × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB code:
5f19
(A).
3. Ligand:
NAG-NAG-MAN-MAN × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
MAN
=Alpha-D-Mannopyranose.
PDB code:
5ikq
(A).
Cluster 2 contains 7 ligand types
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Ligand
Description
1. Ligand:
FLF × 1
flufenamic acid
2-[[3-(Trifluoromethyl)phenyl]amino] benzoic acid
PDB code:
5ikv
(A).
2. Ligand:
ID8 × 1
mefenamic acid
2-[(2,3-Dimethylphenyl)amino]benzoic acid
PDB code:
5ikr
(A).
3. Ligand:
JMS × 1
meclofenamic acid
2-[(2,6-Dichloro-3-Methyl-Phenyl)amino]benzoic acid
PDB code:
5ikq
(A).
4. Ligand:
RCX × 1
rofecoxib
Rofecoxib
PDB code:
5kir
(A).
5. Ligand:
SAL × 1
salicylic acid
2-Hydroxybenzoic acid
PDB code:
5f1a
(A).
6. Ligand:
TLF × 1
tolfenamic acid
2-[(3-Chloro-2-Methylphenyl)amino]benzoic acid
PDB code:
5ikt
(A).
7. Ligand:
EDO × 3
1,2-Ethanediol
PDB codes:
5f19
(A),
5f1a
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
NAG-NAG-MAN × 5
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
MAN
=Alpha-D-Mannopyranose.
PDB codes:
5f19
(A),
5ikr
(A),
5ikt
(A),
5ikv
(A),
5kir
(A).
2. Ligand:
NAG-NAG-MAN-MAN × 2
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
MAN
=Alpha-D-Mannopyranose.
PDB codes:
5f1a
(A),
5ikq
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
COH × 7
Protoporphyrin IX containing co
PDB codes:
5f19
(A),
5f1a
(A),
5ikq
(A),
5ikr
(A),
5ikt
(A),
5ikv
(A),
5kir
(A).
Cluster 5 contains 2 ligand types
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Ligand
Description
1. Ligand:
NAG × 6
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes:
5f19
(A),
5f1a
(A),
5ikq
(A),
5ikr
(A),
5ikv
(A),
5kir
(A).
2. Ligand:
NAG-NAG × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB code:
5ikt
(A).
Cluster 6 contains 2 ligand types
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Ligand
Description
1. Ligand:
BOG × 2
Octyl beta-D-Glucopyranoside
PDB codes:
5ikr
(A),
5ikv
(A).
2. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
5f1a
(A).