Ligand clusters for UniProt code P21179

Ligand clusters for P21179: Catalase HPII from Escherichia coli (strain K12)

		Top 6 (of 11) ligand clusters Cluster 1. 7 ligand types 47 ligands Cluster 2. 6 ligand types 42 ligands Cluster 3. 1 ligand type 1 ligand Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 4bflA

Structures

PDB		Schematic diagram
4bflA
1ggkA
1iphA
3vu3A
6ztwA
		more ...

Cluster 1 contains 7 ligand types

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Ligand		Description
		1. Ligand: HDD × 5 Cis-Heme d hydroxychlorin gamma-Spirolactone PDB codes: 1gge(A), 1ggj(A), 1p81(A), 1ye9(A),
		2. Ligand: HEM × 21 Protoporphyrin IX containing fe PDB codes: 1cf9(A), 1gg9(A), 1ggh(A), 1ggk(A), 1iph(A), 1p7y(A), 1p7z(A), 1p80(A), 1qf7(A), 1qws(A), 3ttt(A), 3ttu(A), 3ttv(A), 3ttw(A), 3ttx(A), 3vu3(A), 4bfl(A), 4enp(A), 4enr(A), 4ent(A), 6by0(A).
		3. Ligand: HDD × 8 Cis-Heme d hydroxychlorin gamma-Spirolactone PDB codes: 3p9r(A), 4enq(A), 4ent(A), 4enu(A), 4enw(A), 6ztv(A), 6ztw(A), 6ztx(A).
		4. Ligand: HDD-HDE × 9 HDD=Cis-Heme d hydroxychlorin gamma-Spirolactone, HDE=Cis-Heme d hydroxychlorin gamma-Spirolactone 17r, 18s. PDB codes: 3p9q(A), 3p9s(A), 3pq2(A), 3pq3(A), 3pq4(A), 3pq5(A), 3pq6(A), 3pq7(A), 3pq8(A).
		5. Ligand: HDD-HEM × 2 HDD=Cis-Heme d hydroxychlorin gamma-Spirolactone, HEM=Protoporphyrin IX containing fe. PDB codes: 4ens(A), 4env(A).
		6. Ligand: HEM-HDE-HEM-HDD × 1 HEM=Protoporphyrin IX containing fe, HDE=Cis-Heme d hydroxychlorin gamma-Spirolactone 17r, 18s, HDD=Cis-Heme d hydroxychlorin gamma-Spirolactone. PDB code: 3p9p(A).
		7. Ligand: HEM-PEO × 1 HEM=Protoporphyrin IX containing fe, PEO=Hydrogen peroxide. PDB code: 1ggf(A).

Cluster 2 contains 6 ligand types

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Ligand		Description
		1. Ligand: HDD × 4 Cis-Heme d hydroxychlorin gamma-Spirolactone PDB codes: 1gge(A), 1ggj(A), 1p81(A), 1ye9(A).
		2. Ligand: HEM × 24 Protoporphyrin IX containing fe PDB codes: 1cf9(A), 1gg9(A), 1ggf(A), 1ggh(A), 1ggk(A), 1iph(A), 1p7y(A), 1p7z(A), 1p80(A), 1qf7(A), 1qws(A), 3p9p(A), 3ttt(A), 3ttu(A), 3ttv(A), 3ttw(A), 3ttx(A), 4bfl(A), 4enp(A), 4enr(A), 4ent(A), 4env(A), 6by0(A).
		3. Ligand: HDD × 4 Cis-Heme d hydroxychlorin gamma-Spirolactone PDB codes: 3p9r(A), 4ent(A), 4enu(A), 6ztx(A).
		4. Ligand: HDD-HDE × 8 HDD=Cis-Heme d hydroxychlorin gamma-Spirolactone, HDE=Cis-Heme d hydroxychlorin gamma-Spirolactone 17r, 18s. PDB codes: 3p9q(A), 3pq2(A), 3pq3(A), 3pq4(A), 3pq5(A), 3pq6(A), 3pq7(A), 3pq8(A).
		5. Ligand: HDD-HEM × 1 HDD=Cis-Heme d hydroxychlorin gamma-Spirolactone, HEM=Protoporphyrin IX containing fe. PDB code: 4ens(A).
		6. Ligand: HDE × 1 Cis-Heme d hydroxychlorin gamma-Spirolactone 17r, 18s PDB code: 3p9s(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: TRS × 1 tromethamine 2-Amino-2-Hydroxymethyl-Propane-1,3-Diol PDB code: 6ztw(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 6ztw(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 6ztw(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 6ztx(A).