Ligand clusters for UniProt code P0AEY8

Ligand clusters for P0AEY8: Multidrug transporter MdfA from Escherichia coli (strain K12)

		Top 6 (of 10) ligand clusters Cluster 1. 5 ligand types 13 ligands Cluster 2. 5 ligand types 14 ligands Cluster 3. 1 ligand type 1 ligand Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 4zp0A

Structures

PDB		Schematic diagram
4zp0A
6vs0A
6vrzA
6vs2A
6ooqA
		more ...

Cluster 1 contains 5 ligand types

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Ligand		Description
		1. Ligand: DXC × 4 deoxycholic acid (3alpha,5beta,12alpha)-3,12-Dihydroxycholan-24-Oic acid PDB codes: 4zp0(A), 6euq(A), 6ooq(A), 6vs1(A).
		2. Ligand: CLM × 3 chloramphenicol Chloramphenicol PDB codes: 4zow(A), 6vrz(A), 6vs0(A).
		3. Ligand: LDA × 4 Lauryl dimethylamine-N-Oxide PDB codes: 4zp2(A), 6oom(A), 6vs2(A).
		4. Ligand: KHJ × 1 1,1'-Dimethyl-4,4'-Bipyridin-1-Ium PDB code: 6oop(A).
		5. Ligand: PGE × 1 Triethylene glycol PDB code: 6euq(A).

Cluster 2 contains 5 ligand types

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Ligand		Description
_Pr		1. Metal: _PR × 9 PDB codes: 6euq(A), 6oom(A), 6oop(A), 6vrz(A), 6vs0(A), 6vs2(A).
		2. Ligand: LDA × 2 Lauryl dimethylamine-N-Oxide PDB codes: 4zp0(A), 4zp2(A).
		3. Ligand: ACT × 1 Acetate ion PDB code: 6euq(A).
		4. Ligand: PG4 × 1 Tetraethylene glycol PDB code: 6euq(A).
		5. Ligand: PGE × 1 Triethylene glycol PDB code: 6euq(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: BNG × 1 B-Nonylglucoside PDB code: 6euq(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: LDA × 1 Lauryl dimethylamine-N-Oxide PDB code: 4zp0(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: PGE × 1 Triethylene glycol PDB code: 6euq(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: OCT × 1 N-Octane PDB code: 6euq(A).