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Ligand clusters for UniProt code P09622

Ligand clusters for P09622: Dihydrolipoyl dehydrogenase, mitochondrial OS=Homo sapiens OX=9606 GN=DLD PE=1 SV=2

Top 6 (of 13) ligand clusters
Cluster 1.
5 ligand types
19 ligands
Cluster 2.
1 ligand type
13 ligands
Cluster 3.
2 ligand types
3 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
2 ligand types
11 ligands
Cluster 6.
2 ligand types
11 ligands
Representative protein: 5j5zA  
JSmol
 

Structures

PDB   Schematic diagram
5j5zA    
6i4pA    
6i4rA    
6i4qA    
6hg8A    
 more ...

 

 Cluster 1 contains 5 ligand types

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Ligand Description


 
1. Ligand: NAD × 1
Nicotinamide-Adenine-Dinucleotide
PDB code: 1zmc(A).


 
2. Ligand: FAD × 13
flavin adenine dinucleotide
Flavin-Adenine dinucleotide
PDB codes: 1zmc(A), 1zmd(A), 1zy8(A), 2f5z(A), 3rnm(A), 5j5z(A), 6hg8(A), 6i4p(A), 6i4q(A), 6i4r(A), 6i4s(A), 6i4t(A), 6i4u(A).


 
3. Ligand: NAI × 1
nadh
1,4-Dihydronicotinamide adenine dinucleotide
PDB code: 1zmd(A).


 
4. Ligand: BTB × 3
2-[Bis-(2-Hydroxy-Ethyl)-Amino]-2-Hydroxymethyl- Propane-1,3-Diol
PDB codes: 6i4p(A), 6i4q(A), 6i4r(A).


 
5. Ligand: BME × 1
Beta-Mercaptoethanol
PDB code: 3rnm(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: FAD × 13
flavin adenine dinucleotide
Flavin-Adenine dinucleotide
PDB codes: 1zmc(A), 1zmd(A), 1zy8(A), 2f5z(A), 3rnm(A), 5j5z(A), 6hg8(A), 6i4p(A), 6i4q(A), 6i4r(A), 6i4s(A), 6i4t(A), 6i4u(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 5j5z(A).


 
2. Ligand: 1PE × 2
Pentaethylene glycol
PDB codes: 6i4t(A), 6i4u(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: NHE × 1
2-[N-Cyclohexylamino]ethane sulfonic acid
PDB code: 3rnm(A).

 

 Cluster 5 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 5j5z(A).


 
2. Ligand: SO4 × 10
Sulfate ion
PDB codes: 1zmc(A), 1zmd(A), 2f5z(A), 6hg8(A), 6i4p(A), 6i4q(A), 6i4r(A), 6i4s(A), 6i4t(A), 6i4u(A).

 

 Cluster 6 contains 2 ligand types

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Ligand Description


 
1. Ligand: SO4 × 10
Sulfate ion
PDB codes: 1zmc(A), 1zmd(A), 2f5z(A), 6hg8(A), 6i4p(A), 6i4q(A), 6i4r(A), 6i4s(A), 6i4t(A), 6i4u(A).


 
2. Ligand: PO4 × 1
Phosphate ion
PDB code: 5j5z(A).

 

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