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Ligand clusters for UniProt code P07570

Ligand clusters for P07570: Gag-Pro polyprotein OS=Mason-Pfizer monkey virus OX=11855 GN=gag-pro PE=1 SV=2

4 ligand clusters
Cluster 1.
2 ligand types
16 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
7 ligands
Cluster 4.
1 ligand type
1 ligand
Representative protein: 3tp1A  
JSmol
 

Structures

PDB   Schematic diagram
3tp1A    
3trnA    
2d4nA    
3tpyA    
3trlA    
 more ...

 

 Cluster 1 contains 2 ligand types

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Ligand Description


 
1. Ligand: UMP × 9
2'-Deoxyuridine 5'-Monophosphate
PDB codes: 3tpy(A), 3tq3(A), 3tq4(A), 3tq5(A), 3trl(A), 3trn(A), 3ts6(A), 3tsl(A), 3tta(A).


 
2. Ligand: DUP × 7
2'-Deoxyuridine 5'-Alpha,Beta-Imido-Triphosphate
PDB codes: 2d4n(A), 3tp1(A), 3tpn(A), 3tpw(A), 3tpy(A), 3tq3(A), 3tq4(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: DUP × 1
2'-Deoxyuridine 5'-Alpha,Beta-Imido-Triphosphate
PDB code: 3tps(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: TRS × 7
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB codes: 2d4n(A), 3tpn(A), 3tps(A), 3tpw(A), 3tpy(A), 3tq4(A), 3tq5(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: DTT × 1
2,3-Dihydroxy-1,4-Dithiobutane
PDB code: 3tpn(A).

 

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