Ligand clusters for UniProt code P00582

Ligand clusters for P00582: DNA polymerase I OS=Escherichia coli (strain K12) GN=polA PE=1 SV=1

		Top 6 (of 9) ligand clusters Cluster 1. 3 ligand types 10 ligands Cluster 2. 1 ligand type 3 ligands Cluster 3. 1 ligand type 3 ligands Cluster 4. 1 ligand type 2 ligands Cluster 5. 4 ligand types 15 ligands Cluster 6. 1 ligand type 7 ligands
Representative protein: 1d8yA

Structures

PDB		Schematic diagram
1d8yA
1d9fA
2kzmA
1krpA
2kfzA
		more ...

Cluster 1 contains 3 ligand types

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Ligand		Description
_Zn		1. Metal: _ZN × 6 PDB codes: 1d9d(A), 1kfs(A), 1krp(A), 1ksp(A), 2kfn(A), 2kfz(A).
		2. Ligand: CTP × 1 Cytidine-5'-Triphosphate PDB code: 1kfd(A).
		3. Ligand: SO4 × 3 Sulfate ion PDB codes: 1d8y(A), 1d9d(A), 1d9f(A).

Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 3 Sulfate ion PDB codes: 1d8y(A), 1d9d(A), 1d9f(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 3 Sulfate ion PDB codes: 1d8y(A), 1d9d(A), 1d9f(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 2 Sulfate ion PDB codes: 1d9d(A), 1d9f(A).

Cluster 5 contains 4 ligand types

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Ligand		Description
_Zn		1. Metal: _ZN × 11 PDB codes: 1d9d(A), 1d9f(A), 1kfs(A), 1krp(A), 2kfn(A), 2kfz(A), 2kzm(A), 2kzz(A),
_Mn		2. Metal: _MN × 2 PDB codes: 2kfn(A), 2kzm(A).
_Eu		3. Metal: _EU × 1 PDB code: 1qsl(A).
_Mg		4. Metal: _MG × 1 PDB code: 1kfs(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
_Zn		1. Metal: _ZN × 7 PDB codes: 1d8y(A), 1d9d(A), 1kfs(A), 1krp(A), 1ksp(A), 2kfn(A), 2kfz(A).