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Ligand clusters for UniProt code O93715
Ligand clusters for O93715: Glucose 1-dehydrogenase OS=Sulfolobus solfataricus GN=gdh PE=1 SV=1
6 ligand clusters
Cluster 1.
6 ligand types
10 ligands
Cluster 2.
2 ligand types
3 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
4 ligands
Representative protein: 2cd9A
Structures
PDB
Schematic diagram
2cd9
A
2cdb
A
2cdc
A
2cda
A
Cluster 1 contains 6 ligand types
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Ligand
Description
1. Ligand:
NAP × 2
Nadp nicotinamide-Adenine-Dinucleotide phosphate
PDB codes:
2cdb
(A),
2cdc
(A).
2. Ligand:
BGC × 1
Beta-D-Glucose
PDB code:
2cdb
(A).
_Zn
3. Metal:
_ZN × 4
PDB codes:
2cd9
(A),
2cda
(A),
2cdb
(A),
2cdc
(A).
4. Ligand:
XYP × 1
Beta-D-Xylopyranose
PDB code:
2cdc
(A).
5. Ligand:
XYS × 1
Xylopyranose
PDB code:
2cdc
(A).
6. Ligand:
NAP × 1
Nadp nicotinamide-Adenine-Dinucleotide phosphate
PDB code:
2cda
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
NAP × 2
Nadp nicotinamide-Adenine-Dinucleotide phosphate
PDB codes:
2cdb
(A),
2cdc
(A).
2. Ligand:
BGC × 1
Beta-D-Glucose
PDB code:
2cdb
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
XYS × 1
Xylopyranose
PDB code:
2cdc
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
XYS × 1
Xylopyranose
PDB code:
2cdc
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
2cdb
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
_Zn
1. Metal:
_ZN × 4
PDB codes:
2cd9
(A),
2cda
(A),
2cdb
(A),
2cdc
(A).