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Ligand clusters for UniProt code O93715

Ligand clusters for O93715: Glucose 1-dehydrogenase OS=Sulfolobus solfataricus GN=gdh PE=1 SV=1

6 ligand clusters
Cluster 1.
6 ligand types
10 ligands
Cluster 2.
2 ligand types
3 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
4 ligands
Representative protein: 2cd9A  
JSmol
 

Structures

PDB   Schematic diagram
2cd9A    
2cdbA    
2cdcA    
2cdaA    

 

 Cluster 1 contains 6 ligand types

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Ligand Description


 
1. Ligand: NAP × 2
Nadp nicotinamide-Adenine-Dinucleotide phosphate
PDB codes: 2cdb(A), 2cdc(A).


 
2. Ligand: BGC × 1
Beta-D-Glucose
PDB code: 2cdb(A).

_Zn
 
3. Metal: _ZN × 4
PDB codes: 2cd9(A), 2cda(A), 2cdb(A), 2cdc(A).


 
4. Ligand: XYP × 1
Beta-D-Xylopyranose
PDB code: 2cdc(A).


 
5. Ligand: XYS × 1
Xylopyranose
PDB code: 2cdc(A).


 
6. Ligand: NAP × 1
Nadp nicotinamide-Adenine-Dinucleotide phosphate
PDB code: 2cda(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: NAP × 2
Nadp nicotinamide-Adenine-Dinucleotide phosphate
PDB codes: 2cdb(A), 2cdc(A).


 
2. Ligand: BGC × 1
Beta-D-Glucose
PDB code: 2cdb(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: XYS × 1
Xylopyranose
PDB code: 2cdc(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: XYS × 1
Xylopyranose
PDB code: 2cdc(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 2cdb(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description

_Zn
 
1. Metal: _ZN × 4
PDB codes: 2cd9(A), 2cda(A), 2cdb(A), 2cdc(A).

 

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