spacer
spacer

Ligand clusters for UniProt code O13833

Ligand clusters for O13833: Poly(A) RNA polymerase protein cid1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cid1 PE=1 SV=2

5 ligand clusters
Cluster 1.
10 ligand types
21 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Representative protein: 4e80C  
JSmol
 

Structures

PDB   Schematic diagram
4e80C    
4e7xA    
4fhxA    
4fhwA    
4nkuA    
 more ...

 

 Cluster 1 contains 10 ligand types

Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file.
Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: ACT × 1
acetic acid
Acetate ion
PDB code: 4e8f(A).


 
2. Ligand: ATP × 1
adenosine triphosphate
Adenosine-5'-Triphosphate
PDB code: 4fhx(A).

_Mg
 
3. Metal: _MG × 8
PDB codes: 4ep7(A), 4fh5(A), 4fhv(A), 4fhw(A), 4fhx(A), 4fhy(A), 4nkt(A).


 
4. Ligand: UTP × 5
Uridine 5'-Triphosphate
PDB codes: 4e80(A), 4ep7(A), 4fh5(A), 4fhp(A).


 
5. Ligand: 2KH × 1
5'-O-[(S)-Hydroxy{[(s)-Hydroxy(phosphonooxy) phosphoryl]amino}phosphoryl]uridine
PDB code: 4nkt(A).


 
6. Ligand: 3AT × 1
3'-Deoxyadenosine-5'-Triphosphate
PDB code: 4fhy(A).


 
7. Ligand: CTP × 1
Cytidine-5'-Triphosphate
PDB code: 4fhv(A).


 
8. Ligand: GTP × 1
Guanosine-5'-Triphosphate
PDB code: 4fhw(A).

_Ca
 
9. Metal: _CA × 1
PDB code: 4fhp(A).


 
10. Ligand: __A-__U × 1
PDB code: 4nku(A).

 

 Cluster 2 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: GOL × 1
Glycerol
PDB code: 4fhp(A).

 

 Cluster 3 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: ACT × 1
acetic acid
Acetate ion
PDB code: 4e7x(A).

 

 Cluster 4 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: ACT × 1
acetic acid
Acetate ion
PDB code: 4e8f(A).

 

 Cluster 5 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description

_Mg
 
1. Metal: _MG × 1
PDB code: 4ep7(A).

 

spacer

spacer