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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code A9FDB7
Ligand clusters for A9FDB7: Cytochrome P450 CYP260A1 OS=Sorangium cellulosum (strain So ce56) OX=448385 GN=sce1588 PE=1 SV=1
Top 6 (of 11) ligand clusters
Cluster 1.
4 ligand types
8 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 5livA
Structures
PDB
Schematic diagram
5liv
A
6f88
A
6f8c
A
6f8a
A
6f85
A
Cluster 1 contains 4 ligand types
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Ligand
Description
1. Ligand:
STR × 2
progesterone
Progesterone
PDB codes:
6f88
(A),
6f8c
(A).
2. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
5liv
(A).
3. Ligand:
HEM × 3
Protoporphyrin IX containing fe
PDB codes:
5liv
(A),
6f88
(A),
6f8c
(A).
4. Ligand:
HEM-HIS × 2
HEM
=Protoporphyrin IX containing fe.
PDB codes:
6f85
(A),
6f8a
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
MES × 1
2-(N-Morpholino)-Ethanesulfonic acid
PDB code:
5liv
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
5liv
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
5liv
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
5liv
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
5liv
(A).