spacer
spacer

PDBsum entry 3ogk

Go to PDB code: 
protein ligands Protein-protein interface(s) links
Protein binding PDB id
3ogk

 

 

 

 

Loading ...

 
JSmol PyMol  
Contents
Protein chains
(+ 2 more) 145 a.a. *
(+ 2 more) 566 a.a. *
(+ 1 more) 13 a.a. *
Ligands
OGK ×8
PO4 ×32
* Residue conservation analysis
PDB id:
3ogk
Name: Protein binding
Title: Structure of coi1-ask1 in complex with coronatine and an incomplete jaz1 degron
Structure: Skp1-like protein 1a. Chain: a, c, e, g, i, k, m, o. Synonym: skp1-like 1, ufo-binding protein 1. Engineered: yes. Coronatine-insensitive protein 1. Chain: b, d, f, h, j, l, n, p. Synonym: f-box/lrr-repeat protein 2, atfbl2, atcoi1, coi-1. Engineered: yes. Jaz1 incomplete degron peptide.
Source: Arabidopsis thaliana. Mouse-ear cress,thale-cress. Organism_taxid: 3702. Gene: skp1a, ask1, skp1, uip1, at1g75950, t4o12.17. Expressed in: spodoptera frugiperda. Expression_system_taxid: 7108. Gene: coi1, fbl2, at2g39940, t28m21.10. Synthetic: yes. Organism_taxid: 3702
Resolution:
2.80Å     R-factor:   0.227     R-free:   0.268
Authors: L.B.Sheard,X.Tan,H.Mao,J.Withers,G.Ben-Nissan,T.R.Hinds,F.Hsu, M.Sharon,J.Browse,S.Y.He,J.Rizo,G.A.Howe,N.Zheng
Key ref: L.B.Sheard et al. (2010). Jasmonate perception by inositol-phosphate-potentiated COI1-JAZ co-receptor. Nature, 468, 400-405. PubMed id: 20927106
Date:
16-Aug-10     Release date:   13-Oct-10    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q39255  (SKP1A_ARATH) -  SKP1-like protein 1A from Arabidopsis thaliana
Seq:
Struc:
160 a.a.
145 a.a.
Protein chains
Pfam   ArchSchema ?
O04197  (COI1_ARATH) -  Coronatine-insensitive protein 1 from Arabidopsis thaliana
Seq:
Struc:
 
Seq:
Struc:
592 a.a.
566 a.a.
Protein chains
Pfam   ArchSchema ?
Q9LMA8  (TI10A_ARATH) -  Protein TIFY 10A from Arabidopsis thaliana
Seq:
Struc:
253 a.a.
13 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: Chains A, B, Q, C, D, R, E, F, S, G, H, I, J, U, K, L, V, M, N, W, O, P, X: E.C.?
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]

 

 
Nature 468:400-405 (2010)
PubMed id: 20927106  
 
 
Jasmonate perception by inositol-phosphate-potentiated COI1-JAZ co-receptor.
L.B.Sheard, X.Tan, H.Mao, J.Withers, G.Ben-Nissan, T.R.Hinds, Y.Kobayashi, F.F.Hsu, M.Sharon, J.Browse, S.Y.He, J.Rizo, G.A.Howe, N.Zheng.
 
  ABSTRACT  
 
No abstract given.

 

Literature references that cite this PDB file's key reference

  PubMed id Reference
22699612 Z.Q.Fu, S.Yan, A.Saleh, W.Wang, J.Ruble, N.Oka, R.Mohan, S.H.Spoel, Y.Tada, N.Zheng, and X.Dong (2012).
NPR3 and NPR4 are receptors for the immune signal salicylic acid in plants.
  Nature, 486, 228-232.  
  21205029 A.Mosblech, C.Thurow, C.Gatz, I.Feussner, and I.Heilmann (2011).
Jasmonic acid perception by COI1 involves inositol polyphosphates in Arabidopsis thaliana.
  Plant J, 65, 949-957.  
21288713 D.M.Duda, D.C.Scott, M.F.Calabrese, E.S.Zimmerman, N.Zheng, and B.A.Schulman (2011).
Structural regulation of cullin-RING ubiquitin ligase complexes.
  Curr Opin Struct Biol, 21, 257-264.  
21666666 J.She, Z.Han, T.W.Kim, J.Wang, W.Cheng, J.Chang, S.Shi, J.Wang, M.Yang, Z.Y.Wang, and J.Chai (2011).
Structural insight into brassinosteroid perception by BRI1.
  Nature, 474, 472-476.
PDB codes: 3rgx 3rgz
21436041 P.Lackman, M.González-Guzmán, S.Tilleman, I.Carqueijeiro, A.C.Pérez, T.Moses, M.Seo, Y.Kanno, S.T.Häkkinen, M.C.Van Montagu, J.M.Thevelein, H.Maaheimo, K.M.Oksman-Caldentey, P.L.Rodriguez, H.Rischer, and A.Goossens (2011).
Jasmonate signaling involves the abscisic acid receptor PYL4 to regulate metabolic reprogramming in Arabidopsis and tobacco.
  Proc Natl Acad Sci U S A, 108, 5891-5896.  
21370976 Z.Hua, and R.D.Vierstra (2011).
The cullin-RING ubiquitin-protein ligases.
  Annu Rev Plant Biol, 62, 299-334.  
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time. Where a reference describes a PDB structure, the PDB codes are shown on the right.

 

spacer

spacer