PDBsum entry 3ogk Go to PDB code:  Pore analysis for: 3ogk calculated with MOLE 2.0 PDB id 3ogk Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.87 4.35 28.5 -1.70 -0.41 14.1 73 4 1 1 0 2 4 0   2 2.99 2.99 40.2 -2.40 -0.81 19.9 85 4 2 5 0 0 2 0   3 2.99 2.99 48.6 -2.06 -0.78 16.4 84 5 2 6 0 0 2 0   4 3.01 3.01 49.9 -1.97 -0.57 16.8 77 5 2 4 0 2 5 0   5 1.42 5.78 68.3 -2.87 -0.16 32.6 78 13 2 2 2 4 1 0  OGK 1100 L PO4 1101 L PO4 1102 L PO4 1104 L 6 1.44 5.83 86.4 -2.93 -0.26 36.5 79 17 8 4 3 4 0 0  OGK 1100 L PO4 1101 L PO4 1102 L 7 1.33 1.50 87.0 -2.39 -0.47 22.2 77 8 4 4 0 3 5 1   8 1.67 1.77 91.7 -1.46 -0.44 19.8 87 6 6 7 7 1 1 1   9 1.59 2.01 101.7 -2.31 -0.64 24.7 86 10 4 7 1 0 2 0   10 2.62 3.18 104.2 -2.15 -0.62 25.7 88 18 8 7 4 0 0 0   11 1.36 6.07 108.1 -2.76 -0.33 31.1 81 19 7 6 3 4 1 0  OGK 1100 P PO4 1101 P PO4 1102 P PO4 1104 P 12 2.84 2.84 108.0 -1.66 -0.58 16.9 82 6 6 11 6 2 5 1   13 1.75 1.81 125.7 -2.07 -0.62 25.8 88 16 10 7 5 0 0 0   14 1.59 1.99 127.0 -2.83 -0.53 34.7 85 20 10 6 2 0 1 0  PO4 1104 H 15 2.49 5.11 127.3 -1.86 -0.48 19.1 80 12 6 8 6 3 6 1   16 2.10 5.13 127.3 -2.51 -0.63 27.4 81 17 10 10 3 4 2 1  PO4 1101 H PO4 1102 H PO4 1103 H 17 1.81 1.98 138.4 -2.51 -0.60 31.4 88 23 12 10 6 0 0 0   18 2.52 3.49 148.2 -2.13 -0.59 23.8 83 20 9 7 4 2 5 0   19 2.65 3.59 162.8 -2.04 -0.53 26.2 87 19 12 10 8 0 1 1   20 2.11 5.03 162.5 -2.09 -0.45 23.9 81 16 12 11 10 6 3 1  PO4 1101 H PO4 1102 H PO4 1103 H 21 1.53 1.84 167.9 -1.68 -0.48 18.5 84 14 6 9 8 2 3 1   22 3.10 4.12 167.4 -1.81 -0.64 20.9 83 16 12 9 7 2 3 1   23 1.96 2.21 179.3 -2.52 -0.66 28.8 85 25 13 9 4 0 3 0  PO4 1102 D PO4 1103 D 24 1.51 6.01 181.8 -2.65 -0.45 34.2 83 36 15 7 7 5 1 0  OGK 1100 P PO4 1101 P PO4 1102 P PO4 1104 P 25 2.12 5.04 186.4 -2.42 -0.67 28.1 82 26 16 8 3 4 0 1  PO4 1101 H PO4 1102 H PO4 1103 H 26 1.57 6.12 194.2 -2.51 -0.47 29.5 84 34 12 8 7 4 1 0  OGK 1100 P PO4 1101 P PO4 1102 P PO4 1104 P 27 1.52 1.84 193.5 -2.79 -0.59 34.4 86 26 15 7 5 0 0 0   28 1.47 5.73 203.9 -2.43 -0.49 29.1 84 34 14 7 8 4 1 0  OGK 1100 P PO4 1101 P PO4 1102 P PO4 1104 P 29 1.41 1.93 226.5 -2.34 -0.52 29.3 82 30 20 9 7 7 1 0  OGK 1100 N PO4 1101 N PO4 1102 N 30 1.72 5.42 271.7 -2.88 -0.47 34.7 83 44 20 7 8 4 1 0  OGK 1100 P PO4 1101 P PO4 1102 P PO4 1104 P Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.