PDBsum entry 3ogk Go to PDB code:  Tunnel analysis for: 3ogk calculated with MOLE 2.0 PDB id 3ogk Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   20 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.18 1.18 20.0 -0.42 -0.31 17.2 76 1 2 1 4 0 0 0   2 1.05 1.78 49.0 0.54 0.29 11.2 64 3 0 1 4 3 1 1   3 1.36 1.36 15.5 -0.51 -0.36 13.0 70 2 1 0 4 0 1 0   4 1.21 2.83 16.6 -1.03 -0.31 23.3 82 2 2 1 4 0 0 0   5 1.27 3.02 18.1 1.22 0.26 6.0 77 2 0 1 6 0 0 0   6 1.21 2.18 15.4 2.69 0.73 3.3 82 0 1 0 7 0 1 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.