6tmj

Electron Microscopy
3.5Å resolution

Cryo-EM structure of Toxoplasma gondii mitochondrial ATP synthase dimer, rotor-stator model

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero pentadecamer (preferred)
PDBe Complex ID:
PDB-CPX-102877 (preferred)
Entry contents:
6 distinct polypeptide molecules
Macromolecules (6 distinct):
ATPTG11 Chain: Q
Molecule details ›
Chain: Q
Length: 134 amino acids
Theoretical weight: 15.43 KDa
Source organism: Toxoplasma gondii GT1
UniProt:
  • Canonical: A0A125YPS4 (Residues: 1-134; Coverage: 100%)
Gene name: TGGT1_263990
Transmembrane protein Chain: K
Molecule details ›
Chain: K
Length: 224 amino acids
Theoretical weight: 24.56 KDa
Source organism: Toxoplasma gondii GT1
UniProt:
  • Canonical: A0A125YSI9 (Residues: 1-224; Coverage: 100%)
Gene name: TGGT1_310360
ATP synthase subunit gamma, mitochondrial Chain: g2
Molecule details ›
Chain: g2
Length: 314 amino acids
Theoretical weight: 34.57 KDa
Source organism: Toxoplasma gondii GT1
UniProt:
  • Canonical: A0A125YUH0 (Residues: 1-314; Coverage: 100%)
Gene name: TGGT1_231910
Sequence domains: ATP synthase
ATP synthase F1 complex delta/epsilon subunit N-terminal domain-containing protein Chain: d2
Molecule details ›
Chain: d2
Length: 183 amino acids
Theoretical weight: 19.48 KDa
Source organism: Toxoplasma gondii GT1
UniProt:
  • Canonical: A0A125YRE2 (Residues: 1-183; Coverage: 100%)
Gene name: TGGT1_226000
Sequence domains: ATP synthase, Delta/Epsilon chain, beta-sandwich domain
Putative atp synthase F1, epsilon subunit Chain: e2
Molecule details ›
Chain: e2
Length: 73 amino acids
Theoretical weight: 8.49 KDa
Source organism: Toxoplasma gondii GT1
UniProt:
  • Canonical: S7VV10 (Residues: 1-73; Coverage: 100%)
Gene name: TGGT1_314820
Sequence domains: Mitochondrial ATP synthase epsilon chain
V-ATPase proteolipid subunit C-like domain-containing protein Chains: H2, I2, J2, K2, L2, M2, N2, O2, P2, Q2
Molecule details ›
Chains: H2, I2, J2, K2, L2, M2, N2, O2, P2, Q2
Length: 166 amino acids
Theoretical weight: 17.75 KDa
Source organism: Toxoplasma gondii GT1
UniProt:
  • Canonical: A0A125YJV2 (Residues: 1-166; Coverage: 100%)
Gene name: TGGT1_249720
Sequence domains: ATP synthase subunit C

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.5Å
Relevant EMDB volumes: EMD-10523