› 4ga2

X-ray diffraction
0.95Å resolution

Structure of the N-terminal domain of Nup358

Released:
DOI: 10.2210/pdb4ga2/pdb
PDB entry 4ga2 coloured by chain, front view.
PDB entry 4ga2 coloured by chain, side view.
PDB entry 4ga2 coloured by chain, top view.
Source organism: Pan troglodytes
Primary publication:
Crystal structure of the N-terminal domain of Nup358/RanBP2.
Kassube SA, Stuwe T, Lin DH, Antonuk CD, Napetschnig J, Blobel G, Hoelz A
J Mol Biol 423 752-65 (2012)
PMID: 22959972

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-124767 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
E3 SUMO-protein ligase RanBP2 Chain: A
Molecule details ›
Chain: A
Length: 150 amino acids
Theoretical weight: 17.31 KDa
Source organism: Pan troglodytes
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: H2QII6 (Residues: 1-145; Coverage: 5%)
Gene names: NUP358, RANBP2
Structure domains: Tetratricopeptide repeat domain

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL12-2
Spacegroup: P21212
Unit cell:
a: 58.788Å b: 83.166Å c: 29.559Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.178 0.177 0.199
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

8 review citations

The Structure of the Nuclear Pore Complex (An Update).
Lin et al. (2019)
7 more

6 mentions without citation

Fast and anisotropic flexibility-rigidity index for protein flexibility and fluctuation analysis.
Opron et al. (2014)
5 more