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U1A-UTRRNA, NMR, 31 STRUCTURES

Source organism: Homo sapiens
Biochemical function: RNA binding
Biological process: not assigned
Cellular component: not assigned

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GO terms

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned

Sequence family

Pfam Protein family (Pfam)
PF00076
Domain description: RNA recognition motif
Occurring in:
  1. U1 small nuclear ribonucleoprotein A
The deposited structure of PDB entry 1aud contains 1 copy of Pfam domain PF00076 (RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)) in U1 small nuclear ribonucleoprotein A. Showing 1 copy in chain B [auth A].

InterPro InterPro annotations
IPR000504
Domain description: RNA recognition motif domain
Occurring in:
  1. U1 small nuclear ribonucleoprotein A
IPR045164
Domain description: RNA-binding region-containing protein RBM41/RNPC3
Occurring in:
  1. U1 small nuclear ribonucleoprotein A
IPR034407
Domain description: U1 small nuclear ribonucleoprotein A, RNA recognition motif 1
Occurring in:
  1. U1 small nuclear ribonucleoprotein A
IPR035979
Domain description: RNA-binding domain superfamily
Occurring in:
  1. U1 small nuclear ribonucleoprotein A
IPR012677
Domain description: Nucleotide-binding alpha-beta plait domain superfamily
Occurring in:
  1. U1 small nuclear ribonucleoprotein A

Structure domain

CATH CATH domain
3.30.70.330
Class: Alpha Beta
Architecture: 2-Layer Sandwich
Topology: Alpha-Beta Plaits
Homology: Alpha-Beta Plaits
Occurring in:
  1. U1 small nuclear ribonucleoprotein A
The deposited structure of PDB entry 1aud contains 1 copy of CATH domain 3.30.70.330 (Alpha-Beta Plaits) in U1 small nuclear ribonucleoprotein A. Showing 1 copy in chain B [auth A].
SCOP SCOP annotation
54929
Class: Alpha and beta proteins (a+b)
Fold: Ferredoxin-like
Superfamily: RNA-binding domain, RBD
Occurring in:
  1. U1 small nuclear ribonucleoprotein A
The deposited structure of PDB entry 1aud contains 1 copy of SCOP domain 54929 (Canonical RBD) in U1 small nuclear ribonucleoprotein A. Showing 1 copy in chain B [auth A].

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