The table below lists all the deprecated search services and the replacement service that should be used in place of the old service.
| Service name | Replacement service | Description |
|---|---|---|
| Slice Viewer | Volume Slicer | View slices of EM tomograms |
| PDBeView | The new search box at the top of the page | Text based and advanced PDB searching tool |
| PDBstatus | The new search box at the top of the page | Search system to query status of PDB entries |
| Gene ontology browser | The new search box at the top of the page | Browse, list and analyse the structural knowledge embodied in the PDB based on gene ontology |
| Enzyme browser | The new search box at the top of the page | Browse, list and analyse the structural knowledge embodied in the PDB based on enzyme classification |
| Structure folds browser | The new search box at the top of the page | Browse, list and analyse the structural knowledge embodied in the PDB based on structure folds in CATH database |
| Protein families browser | The new search box at the top of the page | Browse, list and analyse the structural knowledge embodied in the PDB based on protein family data from Pfam database |
| Taxonomy browser | The new search box at the top of the page | Browse, list and analyse the structural knowledge embodied in the PDB based on taxonomy data from NCBI taxonomy database |
| Compound browser | The new search box at the top of the page | Browse, list and analyse the structural knowledge embodied in the PDB based on chemical component data inthe PDB |
| PDBeLite Retired service |
Not supported please use the search box at the top of this page | Search system based on the relational database |
| PQS-Quick Retired service |
Not supported please use Quaternary structure service | A simple protein quaternary structure search |
| PDBeMapQuick Retired service |
The new search box at the top of the page or the PDBe API | Quick access to cross-reference information to external databases based on PDB id |
| Search OCA Deprecated service |
Not supported please use the search box at the top of this page | OCA form-based system for searching PDB |
| PDBeTemplate Retired service |
Not supported | Local residue interactions in the PDB |
| PDBeAnalysis Retired service |
Not supported | Validation and analysis of PDBe data |
| NMR Representative Retired service |
Not supported | Representative model from NMR ensemble |
| Olderado Retired service |
Not supported | Clustering information for NMR entries in the PDB |
| LeView Retired service |
Not supported | 2D representations of ligands and their environments and binding interactions for PDB entries |
|
Analysis |
Not supported | Validation and analysis of PDBe data |
| Connect Retired service |
Not supported | Query system to access to covalently connected residue pairs |
| PDBeDatabase Retired service |
Not supported | Direct SQL based query access to PDBe database |
| Select Retired service |
Not supported | |
| Statistics Retired service |
Not supported | |
| Template Retired service |
Not supported | Local residue interactions in the PDB |
| Validate Retired service |
Not supported |
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