5aeu

X-ray diffraction
2.49Å resolution

Crystal structure of II9 variant of Biphenyl dioxygenase from Burkholderia xenovorans LB400

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero hexamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-153396 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Biphenyl dioxygenase subunit alpha Chains: A, C, E, G
Molecule details ›
Chains: A, C, E, G
Length: 459 amino acids
Theoretical weight: 51.47 KDa
Source organism: Paraburkholderia xenovorans LB400
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P37333 (Residues: 1-459; Coverage: 100%)
Gene names: Bxe_C1197, Bxeno_C1131, bphA
Sequence domains:
Structure domains:
Biphenyl dioxygenase subunit beta Chains: B, D, F, H
Molecule details ›
Chains: B, D, F, H
Length: 188 amino acids
Theoretical weight: 22.11 KDa
Source organism: Paraburkholderia xenovorans LB400
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P37334 (Residues: 1-188; Coverage: 100%)
Gene names: Bxe_C1196, Bxeno_C1130, bphE
Sequence domains: Ring hydroxylating beta subunit
Structure domains: Nuclear Transport Factor 2; Chain: A,

Ligands and Environments

2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 14-BM-C
Spacegroup: R3
Unit cell:
a: 211.894Å b: 211.894Å c: 168.443Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.196 0.193 0.254
Expression system: Escherichia coli BL21(DE3)