2fv1

X-ray diffraction
1.73Å resolution

UGL_D88N/dGlcA-GlcNAc

Released:
Source organism: Bacillus sp. GL1
Primary publication:
Substrate recognition by unsaturated glucuronyl hydrolase from Bacillus sp. GL1.
Biochem Biophys Res Commun 344 253-62 (2006)
PMID: 16630576

Function and Biology Details

Reaction catalysed:
Beta-D-4-deoxy-Delta(4)-GlcAp-(1->4)-beta-D-Glcp-(1->4)-alpha-L-Rhap-(1->3)-D-Glcp + H(2)O = 5-dehydro-4-deoxy-D-glucuronate + beta-D-Glcp-(1->4)-alpha-L-Rhap-(1->3)-D-Glcp
Biochemical function:
Biological process:
Cellular component:

Structure analysis Details

Assembly composition:
monomeric (preferred)
PDBe Complex ID:
PDB-CPX-193139 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecules (2 distinct):
Unsaturated glucuronyl hydrolase Chains: A, B
Molecule details ›
Chains: A, B
Length: 377 amino acids
Theoretical weight: 42.91 KDa
Source organism: Bacillus sp. GL1
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q9RC92 (Residues: 1-377; Coverage: 100%)
Gene name: ugl
Sequence domains: Glycosyl Hydrolase Family 88
Structure domains: Glycosyltransferase

Ligands and Environments

Carbohydrate polymer : NEW Components: NDG, GAD
No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL38B1
Spacegroup: P212121
Unit cell:
a: 87.735Å b: 94.89Å c: 95.41Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.179 0.179 0.212
Expression system: Escherichia coli BL21(DE3)