Registry
Total: 11,673,122 Interactions from 34 PSICQUIC Services, of which 17 are currently down.
Filter:
Name | Status | Interactions | Version | URLs | Description | Restricted | Tags |
---|---|---|---|---|---|---|---|
APID Interactomes
|
|
0 |
- |
SOAP: http://cicblade.dep.usal.es/psicquic-ws/webservices/psicquic REST: http://cicblade.dep.usal.es/psicquic-ws/webservices/current/search/ REST example |
NO |
protein-protein
imported spoke expansion clustered |
|
BioGrid
|
|
1,513,281 |
1.3.14 |
SOAP: http://tyersrest.tyerslab.com:8805/psicquic/webservices/psicquic REST: http://tyersrest.tyerslab.com:8805/psicquic/webservices/current/search/ REST example |
NO |
protein-protein
internally-curated rapid curation spoke expansion evidence |
|
bhf-ucl
|
|
4,025 |
1.5.1 |
SOAP: http://www.ebi.ac.uk/Tools/webservices/psicquic/bhf-ucl/webservices/psicquic REST: http://www.ebi.ac.uk/Tools/webservices/psicquic/bhf-ucl/webservices/current/search/ REST example |
NO |
protein-protein
smallmolecule-protein nucleicacid-protein internally-curated imex curation mimix curation spoke expansion evidence |
|
ChEMBL
|
|
628,504 |
1.3.1 |
SOAP: http://www.ebi.ac.uk/Tools/webservices/psicquic/chembl/webservices/psicquic REST: http://www.ebi.ac.uk/Tools/webservices/psicquic/chembl/webservices/current/search/ REST example |
NO |
smallmolecule-protein
internally-curated mimix curation spoke expansion evidence |
|
DIP
|
|
0 |
- |
SOAP: https://imex.mbi.ucla.edu/xpsq-dip-all/service/soap/current REST: https://imex.mbi.ucla.edu/xpsq-dip-all/service/rest/current/search/ REST example |
NO |
protein-protein
internally-curated imex curation mimix curation spoke expansion evidence |
|
DIP-IMEx
|
|
0 |
- |
SOAP: https://imex.mbi.ucla.edu/xpsq-dip-imex/service/soap/current/ REST: https://imex.mbi.ucla.edu/xpsq-dip-imex/service/rest/current/search/ REST example |
NO |
protein-protein
internally-curated imex curation mimix curation spoke expansion evidence |
|
HPIDb
|
|
5,054 |
1.5.1 |
SOAP: http://www.ebi.ac.uk/Tools/webservices/psicquic/hpidb/webservices/psicquic REST: http://www.ebi.ac.uk/Tools/webservices/psicquic/hpidb/webservices/current/search/ REST example |
NO |
protein-protein
internally-curated mimix curation spoke expansion evidence |
|
InnateDB
|
|
33,295 |
1.4.0 |
SOAP: https://psicquic.curated.innatedb.com/webservices/psicquic REST: https://psicquic.curated.innatedb.com/webservices/current/search/ REST example |
This service queries all interactions that have been manually annotated to MIMIx standards by the InnateDB curation team. |
NO |
protein-protein
internally-curated spoke expansion mimix curation evidence nucleicacid-protein |
InnateDB-All
|
|
0 |
1.4.0 |
SOAP: https://psicquic.all.innatedb.com/webservices/psicquic REST: https://psicquic.all.innatedb.com/webservices/current/search/ REST example |
This service queries all interactions in InnateDB including both interactions curated by the InnateDB curation team and those integrated from other databases. |
NO |
protein-protein
internally-curated spoke expansion mimix curation evidence nucleicacid-protein |
IntAct
|
|
1,040,809 |
1.5.1 |
SOAP: http://www.ebi.ac.uk/Tools/webservices/psicquic/intact/webservices/psicquic REST: http://www.ebi.ac.uk/Tools/webservices/psicquic/intact/webservices/current/search/ REST example |
Detailed curation of experimentally verified interaction evidences extracted from the literature or directly submitted by authors as part of the publication process. |
NO |
protein-protein
smallmolecule-protein nucleicacid-protein internally-curated imported imex curation mimix curation spoke expansion evidence |
IMEx
|
|
1,145,228 |
1.5.1 |
SOAP: http://www.ebi.ac.uk/Tools/webservices/psicquic/imex/webservices/psicquic REST: http://www.ebi.ac.uk/Tools/webservices/psicquic/imex/webservices/current/search/ REST example |
IMEx contains experimentally verified protein interaction records annotated by members of the IMEx Consortium (www.imexconsortium.org) to a consistant, detailed curation standard. |
NO |
protein-protein
smallmolecule-protein nucleicacid-protein internally-curated imex curation spoke expansion evidence |
mentha
|
|
0 |
- |
SOAP: http://mentha.uniroma2.it:9090/psicquic/webservices/psicquic REST: http://mentha.uniroma2.it:9090/psicquic/webservices/current/search/ REST example |
NO |
protein-protein
imported clustered spoke expansion |
|
MPIDB
|
|
1,750 |
1.5.1 |
SOAP: http://www.ebi.ac.uk/Tools/webservices/psicquic/mpidb/webservices/psicquic REST: http://www.ebi.ac.uk/Tools/webservices/psicquic/mpidb/webservices/current/search/ REST example |
NO |
protein-protein
internally-curated imex curation spoke expansion evidence |
|
iRefIndex
|
|
6,352,803 |
1.3.14 |
SOAP: https://irefindex.vib.be/webservices/psicquic REST: https://irefindex.vib.be/webservices/current/search/ REST example |
NO |
protein-protein
imported bipartite expansion evidence |
|
MatrixDB
|
|
65,000 |
1.3.14 |
SOAP: http://matrixdb.univ-lyon1.fr:8080/psicquic/webservices REST: http://matrixdb.univ-lyon1.fr:8080/psicquic/webservices/current/search/ REST example |
MatrixDB focuses on interactions established by extracellular matrix proteins, proteoglycans and polysaccharides. This service queries experimentally-supported interactions curated from the literature by the MatrixDB curation team. |
NO |
protein-protein
smallmolecule-protein internally-curated imex curation mimix curation spoke expansion evidence |
MINT
|
|
139,449 |
1.5.1 |
SOAP: http://www.ebi.ac.uk/Tools/webservices/psicquic/mint/webservices/psicquic REST: http://www.ebi.ac.uk/Tools/webservices/psicquic/mint/webservices/current/search/ REST example |
NO |
protein-protein
internally-curated imex curation mimix curation spoke expansion evidence |
|
Reactome
|
|
141,996 |
1.3.1 |
SOAP: http://www.ebi.ac.uk/Tools/webservices/psicquic/reactome/webservices/psicquic REST: http://www.ebi.ac.uk/Tools/webservices/psicquic/reactome/webservices/current/search/ REST example |
NO |
protein-protein
predicted evidence |
|
Reactome-FIs
|
|
209,988 |
1.3.1 |
SOAP: http://www.ebi.ac.uk/Tools/webservices/psicquic/reactome-fi/webservices/psicquic REST: http://www.ebi.ac.uk/Tools/webservices/psicquic/reactome-fi/webservices/current/search/ REST example |
NO |
protein-protein
predicted imported clustered |
|
BIND
|
|
0 |
- |
SOAP: http://webservice.baderlab.org:8480/psicquic-ws/webservices/psicquic REST: http://webservice.baderlab.org:8480/psicquic-ws/webservices/current/search/ REST example |
NO |
protein-protein
smallmolecule-protein nucleicacid-protein spoke expansion clustered |
|
Interoporc
|
|
0 |
- |
SOAP: http://webservice.baderlab.org:8580/psicquic-interoporc-ws/webservices/psicquic REST: http://webservice.baderlab.org:8580/psicquic-interoporc-ws/webservices/current/search/ REST example |
NO |
protein-protein
predicted evidence |
|
DrugBank
|
|
0 |
- |
SOAP: http://psicquic.wishartlab.com/psicquic-ws/webservices/psicquic REST: http://psicquic.wishartlab.com/psicquic-ws/webservices/current/search/ REST example |
NO |
smallmolecule-protein
internally-curated mimix curation evidence |
|
EBI-GOA-miRNA
|
|
5,024 |
1.3.13 |
SOAP: https://www.ebi.ac.uk/QuickGO/psicquic-rna/webservices/psicquic REST: https://www.ebi.ac.uk/QuickGO/psicquic-rna/webservices/current/search/ REST example |
NO |
nucleicacid-gene
rapid curation experimentally-observed |
|
I2D
|
|
0 |
- |
SOAP: http://ophid.utoronto.ca/psicquic-ws/webservices/psicquic REST: http://ophid.utoronto.ca/psicquic-ws/webservices/current/search/ REST example |
NO |
protein-protein
internally-curated evidence |
|
UniProt
|
|
42,288 |
1.5.1 |
SOAP: http://www.ebi.ac.uk/Tools/webservices/psicquic/uniprot/webservices/psicquic REST: http://www.ebi.ac.uk/Tools/webservices/psicquic/uniprot/webservices/current/search/ REST example |
NO |
protein-protein
nucleicacid-protein smallmolecule-protein internally-curated imex curation evidence spoke expansion mimix curation |
|
MBInfo
|
|
638 |
1.5.1 |
SOAP: http://www.ebi.ac.uk/Tools/webservices/psicquic/mbinfo/webservices/psicquic REST: http://www.ebi.ac.uk/Tools/webservices/psicquic/mbinfo/webservices/current/search/ REST example |
NO |
protein-protein
nucleicacid-protein smallmolecule-protein internally-curated imex curation evidence spoke expansion |
|
BindingDB
|
|
0 |
- |
SOAP: http://bindingdb.org/psicquic-ws REST: http://bindingdb.org/psicquic-ws/webservices/psicquic/current/search/ REST example |
NO |
smallmolecule-protein
internally-curated evidence spoke expansion experimentally-observed |
|
VirHostNet
|
|
55,115 |
1.4.0 |
SOAP: http://virhostnet.prabi.fr:9090/psicquic/webservices/psicquic REST: http://virhostnet.prabi.fr:9090/psicquic/webservices/current/search/ REST example |
NO |
protein-protein
evidence internally-curated clustered rapid curation experimentally-observed imported spoke expansion |
|
TopFind
|
|
0 |
- |
SOAP: http://clipserve.clip.ubc.ca/topfind-psicquic-ws/psicquic REST: http://clipserve.clip.ubc.ca/topfind-psicquic-ws/current/search/ REST example |
NO |
protein-protein
evidence internally-curated predicted |
|
Spike
|
|
0 |
- |
SOAP: http://spike.cs.tau.ac.il/psicquic-ws/webservices REST: http://spike.cs.tau.ac.il/psicquic-ws/webservices/current/search/ REST example |
NO |
protein-protein
evidence internally-curated |
|
GeneMANIA
|
|
0 |
- |
SOAP: http://webservice.baderlab.org:8380/psi-gm/webservices/psicquic REST: http://webservice.baderlab.org:8380/psi-gm/webservices/current/search/ REST example |
NO |
protein-protein
predicted imported |
|
BAR
|
|
115,325 |
1.5.1 |
SOAP: http://bar.utoronto.ca:9090/psicquic/webservices/psicquic REST: http://bar.utoronto.ca:9090/psicquic/webservices/current/search/ REST example |
NO |
protein-protein
imported spoke expansion predicted internally-curated |
|
EBI-GOA-nonIntAct
|
|
83,778 |
1.3.13 |
SOAP: https://www.ebi.ac.uk/QuickGO/psicquic/webservices/psicquic REST: https://www.ebi.ac.uk/QuickGO/psicquic/webservices/current/search/ REST example |
NO |
protein-protein
nucleicacid-protein rapid curation experimentally-observed |
|
ZINC
|
|
0 |
- |
SOAP: http://psicquic.docking.org/psicquic/webservices/psicquic REST: http://psicquic.docking.org/psicquic/webservices/current/search/ REST example |
ZINC is a database of commercially available compounds for virtual screening. It uses publicly available bioactivity data to allow investigators to access chemical tools for biology. |
NO |
smallmolecule-protein
internally-curated experimentally-observed |
tfact2gene
|
|
89,772 |
1.4.0 |
SOAP: https://psicquic.tfact2gene.biogateway.eu/psicquic/webservices/psicquic REST: https://psicquic.tfact2gene.biogateway.eu/current/search/ REST example |
Compilation of curated and text mined resources containing regulatory relationships between transcription factors and target genes, normalized to human identifiers. |
NO |
text-mining
internally-curated imported nucleicacid-protein evidence |
About PSICQUIC Registry
The PSICQUIC Registry contains the list of PSICQUIC services available, their tags, and their current status. The registry also shows the number of total binary interactions that each resource has made available through PSICQUIC. For more information about PSICQUIC, please visit the Project documentation.