Exercise: analyse a protein sequence

Scenario

You have isolated a protein from squirrel. You want to know more about this protein, perhaps the presence of certain domains or features can give you a clue about its role.

Exercise

Find information about the following protein using InterPro:

>squirrel_seq
MALPARLVPLCCLALLALPAQSCGPGRGPVGRRRYVRKQLVPLLYKQ
FVPSVPERTLGASGPAEGRVARGSERFRDLVPNYNPDIIFKDEENSG
ADRLMTERCKERVNALAIAVMNMWPGVRLRVTEGWDEDGHHAQDSLH
YEGRALDITTSDRDRNKYGLLARLAVEAGFDWVYYESRNHVHVSVKA
GTVGGGCFRETEAAQLWGDARGLRELHRAWVLAADAAGRVVPTPVLL
FLDRDLQRRASFVAVETERPPRKLLLTPWHLVFAARGPAPAPGDFAP
VFARRLRAGDSVLAPGGDALRPARVARVAREEAVGVFAPLTAHGTLL
VNDVLASCYAVLESHQWAHRAFAPLRLLHALGALLPGGAVQPTGMHW
YSRFLYRLAEELLG

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