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PDBsum entry 9ofc

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Pore analysis for: 9ofc calculated with MOLE 2.0 PDB id
9ofc
Pores calculated on whole structure Pores calculated excluding ligands

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18 pores, coloured by radius 16 pores, coloured by radius 16 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.78 2.78 57.9 -0.95 -0.36 17.4 87 4 6 4 3 2 0 0  ATP 701 K
2 1.40 1.55 67.4 -1.56 -0.40 14.4 78 4 4 5 4 3 1 0  
3 2.10 2.82 71.9 -0.88 -0.21 16.1 82 5 5 2 2 4 0 0  
4 1.10 1.47 73.2 -1.94 -0.47 26.2 79 6 7 4 3 3 1 0  
5 3.09 3.09 96.7 -1.09 -0.28 17.9 81 10 5 1 1 4 1 0  
6 2.28 2.43 97.5 -2.24 -0.69 21.5 80 8 8 4 4 2 1 0  ATP 703 L
7 1.15 1.50 103.5 -1.39 -0.31 22.6 83 10 10 5 5 3 1 0  ATP 701 K
8 1.60 1.82 121.3 -1.43 -0.29 19.4 75 12 6 7 6 4 5 0  DA 727 M A23 728 M
9 2.31 2.36 133.9 -2.02 -0.48 21.8 77 8 9 6 7 4 3 0  ATP 701 B
10 1.20 1.50 136.5 -2.03 -0.47 24.4 81 14 11 6 3 3 2 0  
11 1.28 2.25 171.3 -1.27 -0.41 17.8 83 12 12 8 9 4 2 0  ATP 701 A
12 1.21 1.61 194.1 -1.80 -0.47 23.6 83 18 12 8 7 3 2 0  ATP 701 A
13 1.17 1.43 369.9 -1.19 -0.24 19.8 81 32 23 14 26 9 6 0  ATP 701 A DA 729 N A23 730 N
14 1.34 1.37 512.4 -0.95 -0.18 18.5 80 35 25 15 39 11 8 0  DA 707 C DA 709 D A23 710 D ATP 703 H DA 729 N
A23 730 N
15 1.98 3.69 49.4 -1.31 0.11 25.2 68 6 6 0 7 3 4 0  
16 1.80 2.00 62.7 -1.36 -0.02 27.4 75 10 5 0 7 1 4 0  DA 717 I A23 718 I

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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