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PDBsum entry 9ofc

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 9ofc calculated with MOLE 2.0 PDB id
9ofc
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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8 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.20 1.34 49.0 1.25 0.43 5.3 78 2 0 3 13 3 1 2  
2 1.20 2.87 21.0 0.93 0.05 9.0 78 0 2 1 7 1 0 1  
3 1.19 2.88 27.4 1.03 0.09 8.9 76 0 3 1 6 1 0 1  
4 1.25 1.64 15.5 -2.59 -0.32 29.6 73 1 4 1 0 2 0 0  
5 1.14 2.99 18.9 1.99 0.43 3.8 73 0 1 1 7 1 0 1  
6 1.15 3.05 20.5 2.06 0.49 3.0 71 0 1 1 7 2 0 1  
7 1.38 1.38 18.4 -1.67 -0.85 21.0 73 0 3 0 0 0 2 0  
8 0.93 1.09 19.7 -0.07 -0.06 10.8 74 2 0 0 4 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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