PDBsum entry 8yw3 Go to PDB code:  Tunnel analysis for: 8yw3 calculated with MOLE 2.0 PDB id 8yw3 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.18 1.47 17.5 -0.93 -0.29 8.7 77 2 0 2 2 1 0 0   2 1.51 1.51 18.9 -1.12 -0.25 7.5 80 0 2 4 2 2 0 0   3 1.18 1.47 23.2 -1.29 -0.26 8.8 83 3 0 4 3 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.