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PDBsum entry 6bpp
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Tunnel analysis for: 6bpp calculated with  MOLE 2.0
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PDB id
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6bpp
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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4 tunnels,
coloured by tunnel radius |
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3 tunnels,
coloured by
tunnel radius
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3 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.19 |
1.37 |
124.7 |
-0.94 |
-0.27 |
13.1 |
91 |
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9 |
6 |
18 |
18 |
4 |
1 |
0 |
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PO4 612 B 3PE 618 B PA1 1 C KDO 3 C GMH 4 C GMH 5
C GLC 6 C GLC 7 C GLC 8 C GMH 9 C KDO 10 C
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2 |
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1.25 |
1.64 |
28.7 |
2.60 |
0.84 |
0.8 |
74 |
0 |
0 |
2 |
10 |
4 |
0 |
1 |
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3 |
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1.11 |
1.70 |
15.7 |
1.42 |
0.42 |
8.1 |
76 |
1 |
1 |
0 |
5 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program