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PDBsum entry 5wrn

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 5wrn calculated with MOLE 2.0 PDB id
5wrn
Pores calculated on whole structure Pores calculated excluding ligands

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7 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.20 2.30 31.5 -2.89 -0.66 38.2 80 6 5 1 1 0 0 0  
2 2.21 2.52 80.7 -2.17 -0.54 27.9 76 10 9 3 3 2 2 0  
3 1.57 2.18 85.6 -1.12 -0.34 17.4 78 8 6 4 5 3 2 0  DCM 400 B
4 2.11 2.27 92.4 -1.29 -0.28 20.2 82 8 5 5 6 3 1 0  
5 1.67 3.82 104.9 -1.84 -0.45 24.3 84 7 8 7 5 2 1 0  
6 1.67 3.82 114.6 -1.78 -0.52 23.4 84 9 10 7 4 2 1 0  
7 1.46 3.44 26.2 -1.13 0.01 22.2 72 4 1 1 4 2 1 1  DCM 400 A
8 1.90 2.38 31.4 0.97 0.27 6.7 85 3 0 1 3 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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