PDBsum entry 5onh Go to PDB code:  Tunnel analysis for: 5onh calculated with MOLE 2.0 PDB id 5onh Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.27 1.27 16.3 -1.43 -0.02 16.8 63 4 2 0 0 3 0 0   2 1.38 1.59 19.4 -1.62 -0.08 18.4 59 2 2 0 1 3 0 0   3 1.29 1.29 17.4 -0.24 -0.08 15.8 69 2 1 1 3 0 0 0   4 1.22 1.29 23.1 -2.24 -0.37 27.0 87 3 1 3 1 1 0 0   5 1.23 1.28 23.8 -1.98 -0.35 23.4 88 3 0 3 2 1 0 0   6 1.12 1.86 18.1 2.73 0.76 3.8 79 1 0 0 6 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.