PDBsum entry 4b9b Go to PDB code:  Pore analysis for: 4b9b calculated with MOLE 2.0 PDB id 4b9b Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   10 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.62 2.74 25.8 -1.14 -0.24 20.0 74 3 3 1 5 0 3 0   2 2.06 2.17 56.7 -1.68 -0.28 24.6 75 8 7 2 6 0 4 0   3 1.28 1.33 71.6 -1.50 -0.60 16.0 82 8 4 2 4 0 4 0   4 1.28 1.33 71.5 -1.45 -0.61 15.6 82 8 4 2 4 0 4 0   5 1.30 1.38 72.1 -1.43 -0.63 15.4 82 8 4 2 4 0 4 0   6 1.30 1.30 72.8 -1.42 -0.61 14.6 82 8 4 4 4 0 4 0   7 1.31 1.31 75.7 -1.49 -0.69 14.0 82 8 6 3 1 0 3 0   8 1.26 1.35 83.2 -1.60 -0.57 21.3 79 9 9 3 6 0 5 0  CA 503 F 9 1.44 3.26 87.7 -0.73 -0.30 8.7 84 4 5 10 7 10 2 0  PLP 500 E PLP 500 F 10 1.43 1.44 89.1 -0.84 -0.30 9.2 82 5 4 11 6 10 1 0  PLP 500 C PLP 500 D 11 1.48 1.50 89.6 -0.97 -0.33 9.8 83 5 5 10 7 10 2 0  PLP 500 A PLP 500 B 12 1.56 1.60 98.7 -0.80 -0.22 9.4 81 6 4 11 9 11 1 0  PLP 500 G PLP 500 H 13 1.45 1.43 101.7 -0.87 -0.27 10.8 82 5 6 9 8 9 4 0  PLP 500 C PLP 500 D 14 1.47 1.49 103.5 -0.92 -0.27 9.8 81 6 6 10 10 11 4 0  PLP 500 G PLP 500 H Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.