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PDBsum entry 3e2e
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Pore analysis for: 3e2e calculated with  MOLE 2.0
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PDB id
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3e2e
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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11 pores,
coloured by radius |
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11 pores,
coloured by radius
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11 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.38 |
1.77 |
46.3 |
-0.44 |
-0.07 |
12.8 |
76 |
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3 |
4 |
0 |
7 |
4 |
0 |
0 |
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2 |
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2.05 |
2.87 |
59.9 |
-1.64 |
-0.15 |
23.0 |
82 |
8 |
4 |
4 |
3 |
3 |
0 |
0 |
DC 14 T DC 15 T
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3 |
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2.05 |
2.88 |
68.6 |
-1.00 |
-0.37 |
12.6 |
82 |
3 |
3 |
3 |
4 |
2 |
1 |
0 |
DC 121 N DG 123 N DG 124 N G 1 R DT 6 T DG 7 T DC
8 T DT 13 T DC 14 T DC 15 T DG 21 T
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4 |
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1.51 |
2.45 |
74.2 |
0.00 |
-0.25 |
6.3 |
81 |
1 |
1 |
3 |
6 |
1 |
0 |
0 |
DT 119 N DT 120 N DC 121 N DG 123 N DG 124 N G 1
R DT 6 T DG 7 T DC 16 T DT 19 T
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5 |
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1.37 |
1.77 |
75.1 |
-1.26 |
-0.26 |
18.2 |
80 |
8 |
1 |
5 |
5 |
4 |
0 |
0 |
DC 14 T DC 15 T DC 16 T
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6 |
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2.29 |
4.89 |
75.1 |
-1.30 |
-0.66 |
18.1 |
81 |
5 |
4 |
2 |
2 |
0 |
0 |
0 |
DC 121 N DG 123 N DG 124 N DC 129 N DG 130 N DG
131 N DC 132 N G 1 R DA 1 T DT 6 T DG 7 T DC 8 T
DG 21 T
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7 |
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2.18 |
3.55 |
80.8 |
-1.08 |
-0.40 |
17.9 |
85 |
6 |
2 |
4 |
2 |
1 |
0 |
0 |
DG 107 N DA 108 N DC 109 N DT 110 N DC 121 N DG
123 N DG 124 N DG 131 N DC 132 N DT 6 T DG 7 T DG
21 T DA 30 T DT 31 T
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8 |
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2.05 |
3.01 |
111.2 |
-1.37 |
-0.46 |
18.0 |
81 |
8 |
7 |
4 |
5 |
2 |
1 |
0 |
DC 129 N DG 130 N DG 131 N DC 132 N G 1 R DA 1 T
DG 7 T DC 8 T DT 13 T DC 14 T DC 15 T
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9 |
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1.79 |
1.99 |
145.7 |
-0.95 |
-0.21 |
16.3 |
85 |
7 |
5 |
5 |
8 |
3 |
1 |
0 |
DG 126 N DC 127 N G 1 R DC 8 T DG 9 T DC 10 T DC
12 T DT 13 T DC 14 T DC 15 T
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10 |
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2.15 |
2.24 |
151.3 |
-0.26 |
-0.26 |
11.6 |
88 |
6 |
4 |
3 |
8 |
1 |
0 |
0 |
DC 121 N DT 122 N DG 123 N DG 124 N DC 125 N DG
126 N DC 127 N DT 6 T
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11 |
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1.14 |
1.25 |
280.1 |
-0.70 |
-0.30 |
16.2 |
83 |
11 |
7 |
5 |
12 |
2 |
2 |
1 |
DG 107 N DA 108 N DC 109 N DC 127 N DC 129 N DG
130 N DG 131 N DC 132 N DA 1 T DA 30 T DT 31 T
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program