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PDBsum entry 3dr4

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3dr4 calculated with MOLE 2.0 PDB id
3dr4
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.11 1.11 44.9 -0.86 -0.28 16.2 84 6 2 1 6 2 0 0  G4M 500 D
2 1.22 1.27 45.7 -0.67 -0.22 14.7 83 5 1 1 6 2 1 0  G4M 500 A
3 2.26 2.53 46.2 -1.33 -0.48 18.7 89 3 3 1 5 0 1 0  
4 1.67 2.04 46.6 -1.24 -0.57 12.9 83 6 1 1 2 0 4 0  
5 1.69 1.92 57.7 -0.91 -0.51 10.5 86 5 1 1 3 0 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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