PDBsum entry 3dr4 Go to PDB code:  Tunnel analysis for: 3dr4 calculated with MOLE 2.0 PDB id 3dr4 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.60 1.79 25.2 -0.40 0.11 8.6 79 2 1 2 5 5 0 0  G4M 500 A 2 1.56 1.86 30.7 -0.55 0.02 10.0 77 3 1 2 5 5 1 0  G4M 500 D 3 1.56 1.82 30.8 -0.72 -0.04 9.8 77 2 2 2 4 5 0 0  G4M 500 D 4 1.25 1.67 35.0 -0.04 0.17 8.1 73 2 1 2 5 7 0 0  G4M 500 C 5 1.40 1.41 17.2 -1.45 -0.66 15.2 93 3 0 1 1 0 0 0   6 1.22 1.22 18.9 -0.96 -0.14 12.8 77 4 0 1 0 3 1 0   7 1.22 1.22 17.8 -1.01 -0.24 12.6 77 4 0 1 0 3 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.