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PDBsum entry 3d5d
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Contents |
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271 a.a.
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204 a.a.
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202 a.a.
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181 a.a.
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159 a.a.
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145 a.a.
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32 a.a.
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137 a.a.
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122 a.a.
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146 a.a.
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136 a.a.
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117 a.a.
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98 a.a.
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137 a.a.
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117 a.a.
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101 a.a.
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112 a.a.
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92 a.a.
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100 a.a.
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188 a.a.
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76 a.a.
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88 a.a.
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72 a.a.
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59 a.a.
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30 a.a.
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52 a.a.
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44 a.a.
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48 a.a.
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63 a.a.
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Generate full PROCHECK analyses
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PROCHECK summary for 3d5d
Ramachandran plot
PROCHECK statistics
1. Ramachandran Plot statistics
No. of
residues %-tage
------ ------
Most favoured regions [A,B,L] 1973 70.4%**
Additional allowed regions [a,b,l,p] 743 26.5%
Generously allowed regions [~a,~b,~l,~p] 86 3.1%
Disallowed regions [XX] 0 0.0%
---- ------
Non-glycine and non-proline residues 2802 100.0%
End-residues (excl. Gly and Pro) 48
Glycine residues 292
Proline residues 187
----
Total number of residues 3329
Based on an analysis of 118 structures of resolution of at least 2.0 Angstroms and R-factor no greater than 20.0 a good
quality model would be expected to have over 90% in the most favoured regions [A,B,L].
2. G-Factors
Average
Parameter Score Score
--------- ----- -----
Dihedral angles:-
Phi-psi distribution -0.66*
Chi1-chi2 distribution -0.52*
Chi1 only -0.20
Chi3 & chi4 0.52
Omega 0.06
-0.20
=====
Main-chain covalent forces:-
Main-chain bond lengths 0.69
Main-chain bond angles 0.64
0.66
=====
OVERALL AVERAGE 0.13
=====
G-factors provide a measure of how unusual, or out-of-the-ordinary, a property is.
Values below -0.5* - unusual
Values below -1.0** - highly unusual
Important note: The main-chain
bond-lengths and bond angles are compared with
the Engh & Huber (1991) ideal values derived
from small-molecule data. Therefore, structures
refined using different restraints may show
apparently large deviations from normality.
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