spacer
spacer

PDBsum entry 2a06
Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) links
Oxidoreductase PDB id
2a06
Contents
Protein chains
443 a.a.
424 a.a.
365 a.a.
241 a.a.
196 a.a.
99 a.a.
75 a.a.
66 a.a.
42 a.a.
30 a.a.
62 a.a.
Ligands
JZR ×6
PO4 ×11
AZI ×4
UNL ×74
PEE ×5
HEM ×4
SMA ×2
_UQ ×2
CDL ×4
GOL ×7
HEC ×2
FES ×2
Waters ×1612
procheck   Generate full PROCHECK analyses

PROCHECK summary for 2a06

Ramachandran plot

PROCHECK statistics

1. Ramachandran Plot statistics


                                         No. of
                                        residues     %-tage
                                         ------      ------
Most favoured regions      [A,B,L]         3223       92.6%          
Additional allowed regions [a,b,l,p]        239        6.9%          
Generously allowed regions [~a,~b,~l,~p]     13        0.4%          
Disallowed regions         [XX]               7        0.2%*  
                                           ----      ------
Non-glycine and non-proline residues       3482      100.0%

End-residues (excl. Gly and Pro)             46

Glycine residues                            265
Proline residues                            207
                                           ----
Total number of residues                   4000

Based on an analysis of 118 structures of resolution of at least 2.0 Angstroms and R-factor no greater than 20.0 a good quality model would be expected to have over 90% in the most favoured regions [A,B,L].

2. G-Factors

                                                Average
Parameter                            Score       Score
---------                            -----       -----
Dihedral angles:-
     Phi-psi distribution             0.04      
     Chi1-chi2 distribution           0.05      
     Chi1 only                        0.18      
     Chi3 & chi4                      0.50      
     Omega                            0.53      
                                                   0.26      
                                                  =====
Main-chain covalent forces:-
     Main-chain bond lengths          0.63      
     Main-chain bond angles           0.38      
                                                   0.48      
                                                  =====

     OVERALL AVERAGE                               0.35      
                                                  =====

G-factors provide a measure of how unusual, or out-of-the-ordinary, a property is. 

Values below -0.5*  - unusual
Values below -1.0** - highly unusual
Important note: The main-chain bond-lengths and bond angles are compared with the Engh & Huber (1991) ideal values derived from small-molecule data. Therefore, structures refined using different restraints may show apparently large deviations from normality.

 

spacer
spacer