PDBsum entry 2a06 Go to PDB code:  Tunnel analysis for: 2a06 calculated with MOLE 2.0 PDB id 2a06 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   22 tunnels, coloured by tunnel radius 13 tunnels, coloured by tunnel radius 13 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.22 1.42 54.1 0.02 0.00 13.2 87 3 3 5 9 2 0 0  PEE 4017 B PO4 4015 I 2 1.20 1.39 68.6 -0.52 0.08 16.3 76 6 3 3 10 5 2 0  UNL 4035 A UNL 4075 A UNL 4033 I UNL 4072 I 3 1.21 1.41 69.3 -0.64 -0.28 13.3 85 7 4 8 7 2 3 0  UNL 4081 A UNL 4033 I UNL 4072 I 4 1.22 1.39 74.0 -0.85 -0.29 16.0 83 10 3 7 8 2 2 0  UNL 4033 I UNL 4072 I 5 1.25 1.53 78.1 -0.52 0.01 18.1 75 6 6 3 13 5 2 0  JZR 4004 A UNL 4035 A UNL 4075 A UNL 4033 I UNL 4072 I 6 1.30 1.91 19.4 -0.19 -0.26 5.8 90 1 0 4 4 1 1 0   7 1.25 2.06 26.2 -0.13 -0.23 8.8 91 1 2 3 5 1 0 0   8 1.16 1.93 19.4 -1.91 -0.47 25.3 72 3 2 2 0 2 0 1   9 1.17 1.92 19.5 -2.17 -0.57 25.7 72 3 2 2 0 2 0 1   10 1.20 1.89 21.7 -2.07 -0.48 25.4 72 4 2 2 0 2 0 1   11 1.21 2.65 29.5 -1.44 -0.60 18.9 80 3 4 4 0 2 1 1   12 1.21 2.07 30.4 -1.46 -0.56 19.8 80 3 4 4 0 2 1 1   13 1.35 1.35 31.8 -1.42 -0.55 19.2 80 4 4 4 0 2 1 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.