PDBsum entry 1nkt Go to PDB code:  Pore analysis for: 1nkt calculated with MOLE 2.0 PDB id 1nkt Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   11 pores, coloured by radius 22 pores, coloured by radius 22 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.58 1.82 34.1 -1.20 -0.48 13.4 79 4 4 2 4 2 2 0   2 1.35 2.60 39.5 -1.79 -0.29 24.4 78 4 6 3 2 3 0 0  ADP 900 A MG 951 A 3 1.42 3.35 79.5 -1.53 -0.19 19.9 83 8 7 4 5 3 1 0   4 1.48 1.66 98.9 -1.15 -0.17 16.1 86 6 4 4 7 2 2 0   5 1.60 1.57 156.1 -2.64 -0.64 32.6 86 16 17 8 6 1 0 0   6 1.59 1.59 169.9 -2.36 -0.60 27.6 84 17 18 8 4 3 0 0  ADP 900 A MG 951 A 7 1.71 3.18 166.9 -1.77 -0.32 22.1 75 8 8 5 4 6 0 0  ADP 900 A 8 1.16 1.85 170.5 -1.51 -0.36 22.1 77 10 8 4 7 4 0 0  ADP 900 A MG 951 A 9 1.21 1.66 194.1 -1.61 -0.49 21.5 84 20 15 8 13 4 2 0  ADP 900 A MG 951 A 10 1.06 1.86 207.5 -1.85 -0.56 24.6 85 20 20 9 11 3 0 0  ADP 900 A MG 951 A 11 1.13 1.91 237.2 -1.73 -0.40 23.8 84 24 18 9 19 5 1 0  ADP 900 A MG 951 A 12 1.68 1.69 297.1 -2.15 -0.58 25.6 82 21 19 10 8 4 0 0  ADP 900 A MG 951 A 13 1.58 1.81 34.0 -1.18 -0.40 12.5 83 4 4 3 4 2 1 0   14 1.53 1.99 101.0 -1.68 -0.46 22.0 89 4 9 8 9 1 1 0   15 1.56 2.52 113.7 -1.32 -0.36 16.3 87 5 7 8 12 3 2 0   16 1.37 2.65 125.4 -1.55 -0.43 17.6 87 5 12 10 11 4 1 0   17 1.75 3.11 31.1 -2.52 -0.09 26.8 73 5 5 2 0 4 0 0  ADP 901 B 18 1.66 3.54 36.2 -2.12 -0.20 23.2 75 3 5 4 0 4 0 0  ADP 901 B 19 1.71 1.71 38.7 -1.84 -0.59 18.9 82 5 3 4 1 2 0 0  ADP 901 B MG 952 B 20 1.72 1.71 42.9 -1.88 -0.46 20.0 79 6 5 2 0 3 0 0  ADP 901 B 21 1.66 3.53 47.9 -1.68 -0.52 17.8 81 4 5 4 0 3 0 0  ADP 901 B MG 952 B 22 1.35 1.51 62.5 -1.64 -0.54 22.2 85 5 6 5 4 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.