PDBsum entry 1i1d Go to PDB code:  Pore analysis for: 1i1d calculated with MOLE 2.0 PDB id 1i1d Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.77 1.77 34.0 -1.09 -0.11 23.8 81 3 6 2 4 2 0 0   2 1.92 1.89 47.6 -1.58 -0.58 11.2 90 3 1 8 2 1 0 0  COA 900 A COA 901 B 3 1.46 1.46 48.2 -1.35 -0.23 27.4 82 4 9 2 6 2 0 0  16G 906 B 4 1.25 1.26 62.6 -1.02 -0.12 23.5 78 9 8 2 6 3 0 0  COA 900 A 16G 905 A COA 901 B 16G 908 D 5 1.29 1.29 68.8 -1.50 -0.46 28.3 86 7 11 2 5 0 0 0  16G 905 A 16G 908 D Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.