PDBsum entry 1i1d Go to PDB code:  Tunnel analysis for: 1i1d calculated with MOLE 2.0 PDB id 1i1d Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.23 2.77 33.9 -1.58 -0.21 31.6 83 5 7 1 4 1 0 0  16G 906 B 2 1.21 2.83 45.1 -2.09 -0.34 31.9 83 5 7 4 4 1 0 0  16G 906 B 3 1.21 2.83 48.7 -0.55 0.13 18.3 81 5 4 3 6 3 0 0  COA 900 A COA 901 B 16G 906 B 4 1.29 1.83 19.1 1.14 0.51 3.3 86 0 1 1 6 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.