PDBsum entry 1d5b Go to PDB code:  Pore analysis for: 1d5b calculated with MOLE 2.0 PDB id 1d5b Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   10 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.14 1.81 27.8 0.25 0.19 16.1 75 4 2 0 6 2 0 0   2 1.25 1.73 32.0 -1.07 -0.40 11.8 81 4 2 2 2 1 2 0   3 1.20 1.36 34.9 -0.70 -0.42 9.4 90 2 2 8 4 1 0 0   4 1.17 1.43 44.8 -0.51 -0.31 6.1 91 4 0 9 4 1 0 0   5 1.18 1.18 61.9 -0.87 -0.45 8.8 85 3 1 6 2 1 3 0   6 1.47 3.70 70.8 -1.93 -0.54 23.9 86 7 4 6 1 0 3 0   7 1.18 1.37 71.6 -0.75 -0.45 9.3 91 5 2 12 8 2 0 0   8 1.82 1.85 71.8 -1.34 -0.50 13.2 92 6 2 9 4 2 0 0   9 1.17 1.37 93.4 -0.63 -0.39 7.3 91 4 2 12 6 2 2 0   10 1.20 1.20 108.3 -1.14 -0.49 11.1 92 6 4 10 5 2 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.