PDBsum entry 1d5b Go to PDB code:  Tunnel analysis for: 1d5b calculated with MOLE 2.0 PDB id 1d5b Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.21 1.21 16.4 -0.78 -0.70 2.5 99 0 0 3 2 0 0 0   2 1.55 1.71 17.9 -0.28 -0.53 2.2 99 0 0 6 1 1 0 0   3 1.21 1.21 18.9 -0.76 -0.70 2.3 101 0 0 5 2 0 0 0   4 1.50 1.66 20.5 -0.24 -0.54 2.1 101 0 0 8 1 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.