 |
PDBsum entry 1cli
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 1cli calculated with MOLE 2.0
|
PDB id
|
|
|
|
1cli
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
7 pores,
coloured by radius |
 |
8 pores,
coloured by radius
|
8 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.00 |
2.28 |
40.6 |
-1.95 |
-0.56 |
28.1 |
79 |
 |
6 |
8 |
4 |
5 |
0 |
2 |
0 |
 |
|
 |
 |
2 |
 |
2.26 |
2.59 |
48.2 |
-2.79 |
-0.73 |
31.8 |
79 |
12 |
6 |
5 |
3 |
1 |
2 |
0 |
|
 |
3 |
 |
2.02 |
2.16 |
50.6 |
-2.35 |
-0.72 |
24.8 |
80 |
8 |
7 |
3 |
3 |
1 |
1 |
0 |
|
 |
4 |
 |
1.21 |
1.24 |
193.4 |
-0.80 |
-0.33 |
17.1 |
85 |
15 |
13 |
8 |
20 |
3 |
11 |
0 |
|
 |
5 |
 |
1.26 |
2.54 |
26.2 |
-0.09 |
-0.35 |
6.8 |
93 |
3 |
2 |
3 |
3 |
0 |
2 |
0 |
SO4 1350 B
|
 |
6 |
 |
1.91 |
1.92 |
32.5 |
-1.06 |
-0.56 |
11.1 |
90 |
3 |
4 |
4 |
3 |
0 |
3 |
0 |
SO4 1350 B
|
 |
7 |
 |
1.26 |
2.54 |
46.6 |
-0.83 |
-0.43 |
12.6 |
93 |
4 |
4 |
4 |
3 |
0 |
5 |
0 |
SO4 1350 B
|
 |
8 |
 |
2.12 |
3.06 |
41.2 |
-1.46 |
-0.70 |
19.7 |
88 |
4 |
3 |
2 |
4 |
0 |
4 |
0 |
SO4 4350 A
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |