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List of PDB entries containing Het Group RAM

Het Group: RAM

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Name: Alpha-L-Rhamnopyranose

Synonym(s): Alpha-L-Rhamnose; 6-Deoxy-Alpha-L-Mannopyranose; l-Rhamnose; rhamnose

Formula: C₆H₁₂O₅

Compound type: L-Saccharide, Alpha linking

CAS Registry Number: 3615-41-6

The following 100 PDB entries contain the Het Group RAM. The count column shows its number of occurrence in the structure.

PDB id Count Name Method Date

1cb8 ×0 Chondroitinase ac lyase from flavobacterium heparinum X-ray(1.9Å) 14-May-99

1dbg ×0 Crystal structure of chondroitinase b X-ray(1.7Å) 12-Jan-00

1dbo ×0 Crystal structure of chondroitinase b X-ray(1.7Å) 12-Jan-00

1hh3 ×3 Decaplanin first p21-form X-ray(1Å) 11-Jul-05

1hha ×3 Decaplanin first p6122-form X-ray(1.9Å) 11-Jul-05

1hhc ×3 Crystal structure of decaplanin - space group p21, second form X-ray(1.13Å) 11-Jul-05

1hhf ×3 Decaplanin second p6122-form X-ray(1.47Å) 11-Jul-05

1hm2 ×1 Active site of chondroitinase ac lyase revealed by the structure of enzyme-oligosaccharide complexes and mutagenesis X-ray(2Å) 02-May-01

1hm3 ×1 Active site of chondroitinase ac lyase revealed by the structure of enzyme-oligosaccharide complexes and mutagenesis X-ray(2.1Å) 02-May-01

1hmu ×1 Active site of chondroitinase ac lyase revealed by the structure of enzyme-oligosaccharide complexes and mutagenesis X-ray(2Å) 02-May-01

1hmw ×1 Active site of chondroitinase ac lyase revealed by the structure of enzyme-oligosaccharide complexes and mutagenesis X-ray(2.3Å) 02-May-01

1m7d ×0 Crystal structure of a monoclonal fab specific for shigella flexneri y lipopolysaccharide complexed with a trisaccharide X-ray(2.3Å) 22-Jul-03

1m7i ×0 Crystal structure of a monoclonal fab specific for shigella flexneri y lipopolysaccharide complexed with a pentasaccharide X-ray(2.5Å) 22-Jul-03

1mfb ×0 High resolution structures of antibody fab fragment complexed with cell-surface oligosaccharide of pathogenic salmonella X-ray(2.1Å) 31-Jan-94

1mfc ×0 High resolution structures of antibody fab fragment complexed with cell-surface oligosaccharide of pathogenic salmonella X-ray(2.1Å) 31-Jan-94

1ofl ×0 Crystal structure of chondroitinase b complexed to dermatan sulfate hexasaccharide X-ray(1.7Å) 10-Jun-04

1ofm ×0 Crystal structure of chondroitinase b complexed to chondroitin 4- sulfate tetrasaccharide X-ray(1.8Å) 19-Apr-04

1tyu ×0 Structure of tailspike-protein X-ray(1.8Å) 23-Jul-97

1tyw ×0 Structure of tailspike-protein X-ray(1.8Å) 23-Jul-97

1tyx ×0 Title of tailspike-protein X-ray(1.8Å) 23-Jul-97

1w0q ×0 A three dimensional structural model of stem bromelain: a critical comparative analysis of glycosylation towards functional and structural stability Theor. model 25-Jan-06

2e0s ×0 Carbohydrate recognition of c-terminal half of lactoferrin: crystal structure of the complex of c-lobe with rhamnose at 2.15 a resolution X-ray(2.15Å) 24-Oct-06

2fuq ×1 Crystal structure of heparinase ii X-ray(2.15Å) 18-Apr-06

2fv0 ×0 Ugl_d88n/dglca-glc-rha-glc X-ray(1.91Å) 30-May-06

2gh4 ×0 Yter/d143n/dgala-rha X-ray(1.9Å) 29-Aug-06

2jxa ×0 Mouse latrophilin-1 gpcr gal_lectin domain in complex with rhamnose NMR(25 models) 29-Apr-08

2vbm ×0 Tailspike protein of bacteriophage sf6 complexed with tetrasaccharide X-ray(2Å) 22-Apr-08

2vjj ×0 Tailspike protein of e.Coli bacteriophage hk620 in complex with hexasaccharide X-ray(1.59Å) 01-Jul-08

2x6w ×0 Tailspike protein mutant e372q of e.Coli bacteriophage hk620 in complex with hexasaccharide X-ray(1.35Å) 02-Mar-11

2x6x ×0 Tailspike protein mutant d339n of e.Coli bacteriophage hk620 in complex with hexasaccharide X-ray(1.48Å) 02-Mar-11

2x6y ×0 Tailspike protein mutant d339a of e.Coli bacteriophage hk620 in complex with hexasaccharide X-ray(1.35Å) 02-Mar-11

2x85 ×0 Tailspike protein of e. Coli bacteriophage hk620 in complex with hexasaccharide X-ray(1.5Å) 23-Mar-11

2zux ×6 Crystal structure of rhamnogalacturonan lyase yesw complexed with rhamnose X-ray(1.32Å) 03-Feb-09

2zx2 ×2 Rhamnose-binding lectin csl3 X-ray(1.8Å) 30-Jun-09

3bz4 ×18 Crystal structure of fab f22-4 in complex with a shigella flexneri 2a o-ag decasaccharide X-ray(1.8Å) 01-Jul-08

3c6s ×21 Crystal structure of fab f22-4 in complex with a shigella flexneri 2a o-ag pentadecasaccharide X-ray(1.8Å) 01-Jul-08

3cg9 ×1 Crystal structure of the complex of peptidoglycan recognition protein with methyloxane-2,3,4,5-tetrol at 2.9 a resolution X-ray(2.9Å) 01-Apr-08

3e80 ×2 Structure of heparinase ii complexed with heparan sulfate degradation disaccharide product X-ray(2.35Å) 30-Dec-08

3njv ×0 Rhamnogalacturonan lyase from aspergillus aculeatus k150a substrate complex X-ray(2.4Å) 06-Oct-10

3nno ×0 Crystal structure of the complex of peptidoglycan recognition protein (pgrp-s) with alpha-rhamnose at 2.9 a resolution X-ray(2.9Å) 21-Jul-10

3rum ×1 New strategy to analyze structures of glycopeptide antibiotic-target complexes X-ray(1.85Å) 06-Jun-12

3s04 ×1 Crystal structure of escherichia coli type i signal peptidase in complex with an arylomycin lipoglycopeptide antibiotic X-ray(2.44Å) 05-Oct-11

3th0 ×0 P22 tailspike complexed with s.Paratyphi o antigen octasaccharide X-ray(1.75Å) 29-Aug-12

3w5n ×4 Crystal structure of streptomyces avermitilis alpha-l-rhamnosidase complexed with l-rhamnose X-ray(1.8Å) 20-Mar-13

4gji ×3 Crystal structure of pseudomonas stutzeri l-rhamnose isomerase mutant h101n in complex with l-rhamnopyranose X-ray(1.7Å) 12-Dec-12

4hih ×1 Anti-streptococcus pneumoniae 23f fab 023.102 with bound rhamnose. X-ray(2Å) 28-Aug-13

4hii ×1 Anti-streptococcus pneumoniae 23f fab 023.102 with bound rhamnose- galactose X-ray(2.3Å) 28-Aug-13

4hij ×1 Anti-streptococcus pneumoniae 23f fab 023.102 with bound l-rhamnose- (1-2)-alpha-d-galactose-(3-o)-phosphate-2-glycerol X-ray(2.1Å) 28-Aug-13

4ptu ×0 Crystal structure of anti-23f strep fab c05 with rhamnose X-ray(1.51Å) 04-Mar-15

4urr ×30 Tailspike protein of sf6 bacteriophage bound to shigella flexneri o- antigen octasaccharide fragment X-ray(1.95Å) 15-Jul-15

4wzz ×0 Crystal structure of an abc transporter solute binding protein (ipr025997) from clostridium phytofermentas (cphy_0583, target efi- 511148) with bound l-rhamnose X-ray(1.7Å) 17-Dec-14

4xhc ×1 Rhamnosidase from klebsiella oxytoca with rhamnose bound X-ray(2.7Å) 15-Apr-15

4xkw ×0 Tailspike protein mutant d339n of e. Coli bacteriophage hk620 in complex with pentasaccharide X-ray(1.45Å) 20-Jan-16

4xla ×0 Tailspike protein mutant d339a of e. Coli bacteriophage hk620 in complex with pentasaccharide X-ray(1.47Å) 20-Jan-16

4xle ×0 Tailspike protein double mutant d339n/e372a of e. Coli bacteriophage hk620 in complex with hexasaccharide X-ray(1.45Å) 20-Jan-16

4xlf ×0 Tailspike protein double mutant d339n/e372a of e. Coli bacteriophage hk620 in complex with pentasaccharide X-ray(1.75Å) 20-Jan-16

4xm3 ×0 Tailspike protein mutant e372a of e. Coli bacteriophage hk620 in complex with pentasaccharide X-ray(1.27Å) 27-Jan-16

4xmy ×0 Tailspike protein double mutant d339a/e372a of e. Coli bacteriophage hk620 in complex with pentasaccharide X-ray(1.45Å) 27-Jan-16

4xn3 ×0 Tailspike protein mutant e372a of e. Coli bacteriophage hk620 in complex with hexasaccharide X-ray(1.65Å) 27-Jan-16

4xop ×0 Tailspike protein double mutant d339n/e372q of e. Coli bacteriophage hk620 in complex with hexasaccharide X-ray(1.59Å) 27-Jan-16

4xor ×0 Tailspike protein double mutant d339n/e372q of e. Coli bacteriophage hk620 in complex with pentasaccharide X-ray(1.5Å) 27-Jan-16

4xot ×0 Tailspike protein mutant e372q of e. Coli bacteriophage hk620 in complex with pentasaccharide X-ray(1.06Å) 27-Jan-16

4xqh ×0 Tailspike protein mutant e372q (delta d470/n471) of e. Coli bacteriophage hk620 in complex with hexasaccharide X-ray(1.71Å) 27-Jan-16

4xqi ×0 Tailspike protein mutant e372q (delta d470/n471) of e. Coli bacteriophage hk620 in complex with pentasaccharide X-ray(1.85Å) 27-Jan-16

4xr6 ×0 Tailspike protein double mutant d339a/e372q of e. Coli bacteriophage hk620 in complex with hexasaccharide X-ray(1.78Å) 27-Jan-16

4yej ×0 Tailspike protein double mutant d339a/e372q of e. Coli bacteriophage hk620 in complex with pentasaccharide X-ray(1.4Å) 09-Mar-16

4yel ×0 Tailspike protein double mutant d339a/e372a of e. Coli bacteriophage hk620 in complex with hexasaccharide X-ray(1.72Å) 09-Mar-16

5h4s ×2 Crystal structure of a rhamnose-binding lectin sul-i from the toxopneustid sea urchin toxopneustes pileolus X-ray(1.8Å) 17-May-17

5mui ×0 Glycoside hydrolase bt_0996 X-ray(1.77Å) 22-Mar-17

5muj ×0 Bt0996 rgii chain b complex X-ray(1.37Å) 05-Apr-17

5mwk ×0 Glycoside hydrolase bt_0986 X-ray(2Å) 22-Mar-17

5olr ×4 Rhamnogalacturonan lyase X-ray(1.07Å) 29-Nov-17

5ols ×1 Rhamnogalacturonan lyase X-ray(2.2Å) 29-Nov-17

5xqg ×7 Crystal structure of a pl 26 exo-rhamnogalacturonan lyase from penicillium chrysogenum complexed with unsaturated galacturonosyl rhamnose X-ray(2.74Å) 21-Mar-18

5xqj ×7 Crystal structure of a pl 26 exo-rhamnogalacturonan lyase from penicillium chrysogenum complexed with unsaturated galacturonosyl rhamnose substituted with galactose X-ray(2.75Å) 04-Apr-18

5xqo ×2 Crystal structure of a pl 26 exo-rhamnogalacturonan lyase from penicillium chrysogenum complexed with tetrameric substrate X-ray(3.2Å) 21-Mar-18

5z6b ×0 Crystal structure of sugar-binding protein yeso in complex with rhamnogalacturonan trisaccharide X-ray(1.58Å) 23-Jan-19

6euf ×1 The gh43, beta 1,3 galactosidase, bt0265 X-ray(2.2Å) 17-Oct-18

6f7k ×10 Crystal structure of dettilon tailspike protein (gp208) X-ray(2.1Å) 19-Dec-18

6g0x ×0 Tailspike protein of e. Coli bacteriophage hk620 in complex with pentasaccharide X-ray(1.41Å) 04-Apr-18

6gvp ×0 Tailspike protein mutant e372q (delta n471/s472) of e. Coli bacteriophage hk620 in complex with hexasaccharide X-ray(1.71Å) 11-Jul-18

6gvr ×0 Tailspike protein mutant e372q (delta n471/s472) of e. Coli bacteriophage hk620 in complex with pentasaccharide X-ray(1.85Å) 11-Jul-18

6kc2 ×1 Crystal structure of lectin from pleurotus ostreatus in complex with rhamnose X-ray(2.25Å) 05-Aug-20

6zi3 ×6 Crystal structure of olep-6deb bound to l-rhamnose X-ray(2.08Å) 21-Oct-20

6zi7 ×2 Crystal structure of olep-oleandolide(deo) bound to l-rhamnose X-ray(2.28Å) 21-Oct-20

7dfs ×1 Crystal structure of a novel 4-o-alpha-l-rhamnosyl-beta-d- glucuronidase from fusarium oxysporum 12s - rha-glca complex X-ray(1.49Å) 17-Mar-21

7esm ×0 Crystal structure of a l-rhamnose-alpha-1,4-d-glucuronate lyase from fusarium oxysporum 12s, l-rha complex X-ray(1.4Å) 04-Aug-21

7esn ×0 Crystal structure of a l-rhamnose-alpha-1,4-d-glucuronate lyase from fusarium oxysporum 12s, h105f rha-glca complex X-ray(2.42Å) 04-Aug-21

7lkc ×1 Crystal structure of keratinimicin a X-ray(0.95Å) 07-Dec-22

7yqs ×0 Neutron structure of a l-rhamnose-alpha-1,4-d-glucuronate lyase from fusarium oxysporum 12s, l-rha complex X-ray(1.25Å) 09-Aug-23

8cse ×4 Wbbb in complex with alpha-rha-(1-3)-beta-glcnac acceptor X-ray(2.3Å) 09-Nov-22

8csf ×1 Wbbb d232c-kdo adduct + alpha-rha(1,3)glcnac ternary complex X-ray(2.4Å) 09-Nov-22

8i4d ×0 X-ray structure of a l-rhamnose-alpha-1,4-d-glucuronate lyase from fusarium oxysporum 12s, l-rha complex at 100k X-ray(1.06Å) 24-Jan-24

8jq4 ×1 Crystal structure of lactobacillus rhamnosus l-rhamnose isomerase in complex with l-rhamnose X-ray(1.61Å) 13-Mar-24

8two ×0 Avrb bound with udp and rin4_t166-rha X-ray(2.09Å) 28-Feb-24

9g17 ×0 Structure of pslg with a covalently- bound pentasaccharide X-ray(1.55Å) 05-Mar-25

9g18 ×0 Structure of pslg with an iminosugar inhibitor X-ray(1.5Å) 05-Mar-25

9myj ×1 Structure of p. Gingivalis pork and porn complexes from cryo electron microscopy 16-Jul-25

9mzu ×5 Structure of porkn from porphyromonas gingivalis 16-Apr-25

9p6h ×2 Structure of p. Gingivalis pork and porn complexes from cryo electron microscopy 16-Jul-25