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EBI
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Ligand clusters for UniProt code Q9V2T0
Ligand clusters for Q9V2T0: Endoglucanase A from Pyrococcus furiosus
Top 6 (of 21) ligand clusters
Cluster 1.
4 ligand types
25 ligands
Cluster 2.
2 ligand types
6 ligands
Cluster 3.
2 ligand types
7 ligands
Cluster 4.
2 ligand types
3 ligands
Cluster 5.
2 ligand types
5 ligands
Cluster 6.
1 ligand type
3 ligands
Representative protein: 3vgiA
Structures
PDB
Schematic diagram
3vgi
A
3wy6
A
3wxp
A
3wq0
A
3wr0
A
more ...
Cluster 1 contains 4 ligand types
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Ligand
Description
1. Ligand:
GOL × 19
glycerin
Glycerol
PDB codes:
3vgi
(A),
3wq0
(A),
3wq1
(A),
3wq7
(A),
3wr0
(A),
3wt3
(A),
3wy6
(A),
2. Ligand:
BGC-BGC × 3
BGC
=Beta-D-Glucopyranose.
PDB codes:
3wxp
(A),
3wy6
(A).
3. Ligand:
BGC-BGC-BGC-BGC × 2
BGC
=Beta-D-Glucopyranose.
PDB codes:
3wq0
(A),
3wq1
(A).
4. Ligand:
BGC × 1
Beta-D-Glucopyranose
PDB code:
3wy6
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
3vgi
(A),
3wt3
(A).
2. Ligand:
NHE × 4
2-[N-Cyclohexylamino]ethane sulfonic acid
PDB codes:
3vgi
(A),
3wq0
(A),
3wq1
(A),
3wr0
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 4
glycerin
Glycerol
PDB codes:
3vgi
(A),
3wq7
(A),
3wr0
(A),
3wt3
(A).
2. Ligand:
NHE × 3
2-[N-Cyclohexylamino]ethane sulfonic acid
PDB codes:
3wq1
(A),
3wxp
(A),
3wy6
(A).
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
3wq7
(A),
3wt3
(A).
2. Ligand:
NHE × 1
2-[N-Cyclohexylamino]ethane sulfonic acid
PDB code:
3wq1
(A).
Cluster 5 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 4
glycerin
Glycerol
PDB codes:
3wq7
(A),
3wr0
(A),
3wt3
(A),
3wy6
(A).
2. Ligand:
NHE × 1
2-[N-Cyclohexylamino]ethane sulfonic acid
PDB code:
3wy6
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
NHE × 3
2-[N-Cyclohexylamino]ethane sulfonic acid
PDB codes:
3vgi
(A),
3wq0
(A),
3wq1
(A).