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PDBsum entry 3vgi

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protein ligands metals links
Hydrolase PDB id
3vgi

 

 

 

 

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JSmol PyMol  
Contents
Protein chain
270 a.a.
Ligands
NHE ×2
GOL ×11
Metals
_CA
Waters ×328
PDB id:
3vgi
Name: Hydrolase
Title: The crystal structure of hyperthermophilic family 12 endocellulase from pyrococcus furiosus
Structure: Endoglucanase a. Chain: a. Engineered: yes
Source: Pyrococcus furiosus. Organism_taxid: 2261. Gene: egla. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
1.07Å     R-factor:   0.129     R-free:   0.158
Authors: M.Kataoka,H.-W.Kim,K.Ishikawa
Key ref: H.W.Kim et al. (2012). Atomic resolution of the crystal structure of the hyperthermophilic family 12 endocellulase and stabilizing role of the DxDxDG calcium-binding motif in Pyrococcus furiosus. Febs Lett, 586, 1009-1013. PubMed id: 22569255
Date:
11-Aug-11     Release date:   12-Sep-12    
PROCHECK
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 Headers
 References

Protein chain
Pfam   ArchSchema ?
Q9V2T0  (Q9V2T0_9EURY) -  Endoglucanase A from Pyrococcus furiosus
Seq:
Struc:
319 a.a.
270 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.?
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]

 

 
Febs Lett 586:1009-1013 (2012)
PubMed id: 22569255  
 
 
Atomic resolution of the crystal structure of the hyperthermophilic family 12 endocellulase and stabilizing role of the DxDxDG calcium-binding motif in Pyrococcus furiosus.
H.W.Kim, M.Kataoka, K.Ishikawa.
 
  ABSTRACT  
 
Hyperthermophilic glycoside hydrolase family 12 endocellulase (EGPf) from the archaeon Pyrococcus furiosus catalyzes the hydrolytic cleavage of β-1,4-glucosidic linkage in β-glucan cellulose. A truncated EGPf (EGPfΔN30) mutant lacking the proline and hydroxyl-residue rich region at the N terminus was constructed, and its crystal structure was resolved at an atomic resolution of 1.07 Å. Our results indicate that the structure of EGPf, which consists of a β-jelly roll, exhibits structural similarity with the endocellulase of Thermotoga maritima. Additionally, we further determined that the thermostability of EGPf is maintained in part by the binding of Ca²⁺ in a DxDxDG Ca²⁺-binding motif, atypical of most archaeal proteins.
 

 

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