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Ligand clusters for UniProt code Q9UR08
Ligand clusters for Q9UR08: Aristolochene synthase from Aspergillus terreus
Top 6 (of 7) ligand clusters
Cluster 1.
13 ligand types
54 ligands
Cluster 2.
2 ligand types
4 ligands
Cluster 3.
1 ligand type
4 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 5imiA
Structures
PDB
Schematic diagram
5imi
A
5imn
A
5imp
A
4kux
A
5ivg
A
more ...
Cluster 1 contains 13 ligand types
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Ligand
Description
_Mg
1. Metal:
_MG × 31
PDB codes:
4kux
(A),
4kvd
(A),
4kvi
(A),
4kvw
(A),
4kvy
(A),
4kwd
(A),
5imi
(A),
5imn
(A),
5imp
(A),
5in8
(A),
5ivg
(A),
2. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
4kvd
(A).
3. Ligand:
POP × 8
Pyrophosphate 2-
PDB codes:
4kvd
(A),
4kvi
(A),
4kvw
(A),
4kvy
(A),
4kwd
(A),
5imi
(A),
5imn
(A),
5imp
(A).
4. Ligand:
JF1 × 4
(1s,5s,8s,9ar)-1,9a-Dimethyl-8-(Prop-1-En-2-Yl) octahydro-2h-Quinolizinium
PDB codes:
4kvy
(A),
5imi
(A),
5imn
(A),
5imp
(A).
5. Ligand:
FPS × 2
S-[(2e,6e)-3,7,11-Trimethyldodeca-2,6,10-Trienyl] trihydrogen thiodiphosphate
PDB codes:
4kux
(A),
5ivg
(A).
6. Ligand:
1SS × 1
(1r,4as,7s,8ar)-1,4a-Dimethyl-7-(Prop-1-En-2-Yl) decahydroquinolinium
PDB code:
4kvd
(A).
7. Ligand:
1SV × 1
(4as,7s)-4a-Methyl-7-(Prop-1-En-2-Yl)-2,3,4,4a,5,6,7,8- Octahydroquinolinium
PDB code:
4kvi
(A).
8. Ligand:
FDF × 1
(2e,6e)-12-Fluoro-11-(Fluoromethyl)-3,7-Dimethyldodeca- 2,6,10-Trien-1-Yl trihydrogen diphosphate
PDB code:
3cke
(A).
9. Ligand:
FPF × 1
(2z,6e)-2-Fluoro-3,7,11-Trimethyldodeca-2,6,10-Trien- 1-Yl trihydrogen diphosphate
PDB code:
3bny
(A).
10. Ligand:
FPP × 1
Farnesyl diphosphate
PDB code:
3bnx
(A).
11. Ligand:
JF2 × 1
(1r,5r,8r,9as)-1,9a-Dimethyl-8-(Prop-1-En-2-Yl) octahydro-2h-Quinolizinium
PDB code:
4kwd
(A).
12. Ligand:
JF4 × 1
(3r,5s,6r,9ar)-6,9a-Dimethyl-3-(Prop-1-En-2-Yl) octahydro-2h-Quinolizinium
PDB code:
4kvw
(A).
13. Ligand:
PO4 × 1
Phosphate ion
PDB code:
5in8
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
4kvd
(A).
2. Ligand:
BME × 3
Beta-Mercaptoethanol
PDB codes:
2e4o
(A),
2oa6
(A),
3bnx
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 4
glycerin
Glycerol
PDB codes:
5imi
(A),
5imn
(A),
5imp
(A),
5in8
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
5in8
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
5ivg
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
BME × 1
Beta-Mercaptoethanol
PDB code:
2e4o
(A).