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Ligand clusters for UniProt code Q9UR08

Ligand clusters for Q9UR08: Aristolochene synthase from Aspergillus terreus

Top 6 (of 7) ligand clusters
Cluster 1.
13 ligand types
54 ligands
Cluster 2.
2 ligand types
4 ligands
Cluster 3.
1 ligand type
4 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 5imiA  
JSmol
 

Structures

PDB   Schematic diagram
5imiA    
5imnA    
5impA    
4kuxA    
5ivgA    
 more ...

 

 Cluster 1 contains 13 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 31
PDB codes: 4kux(A), 4kvd(A), 4kvi(A), 4kvw(A), 4kvy(A), 4kwd(A), 5imi(A), 5imn(A), 5imp(A), 5in8(A), 5ivg(A),


 
2. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 4kvd(A).


 
3. Ligand: POP × 8
Pyrophosphate 2-
PDB codes: 4kvd(A), 4kvi(A), 4kvw(A), 4kvy(A), 4kwd(A), 5imi(A), 5imn(A), 5imp(A).


 
4. Ligand: JF1 × 4
(1s,5s,8s,9ar)-1,9a-Dimethyl-8-(Prop-1-En-2-Yl) octahydro-2h-Quinolizinium
PDB codes: 4kvy(A), 5imi(A), 5imn(A), 5imp(A).


 
5. Ligand: FPS × 2
S-[(2e,6e)-3,7,11-Trimethyldodeca-2,6,10-Trienyl] trihydrogen thiodiphosphate
PDB codes: 4kux(A), 5ivg(A).


 
6. Ligand: 1SS × 1
(1r,4as,7s,8ar)-1,4a-Dimethyl-7-(Prop-1-En-2-Yl) decahydroquinolinium
PDB code: 4kvd(A).


 
7. Ligand: 1SV × 1
(4as,7s)-4a-Methyl-7-(Prop-1-En-2-Yl)-2,3,4,4a,5,6,7,8- Octahydroquinolinium
PDB code: 4kvi(A).


 
8. Ligand: FDF × 1
(2e,6e)-12-Fluoro-11-(Fluoromethyl)-3,7-Dimethyldodeca- 2,6,10-Trien-1-Yl trihydrogen diphosphate
PDB code: 3cke(A).


 
9. Ligand: FPF × 1
(2z,6e)-2-Fluoro-3,7,11-Trimethyldodeca-2,6,10-Trien- 1-Yl trihydrogen diphosphate
PDB code: 3bny(A).


 
10. Ligand: FPP × 1
Farnesyl diphosphate
PDB code: 3bnx(A).


 
11. Ligand: JF2 × 1
(1r,5r,8r,9as)-1,9a-Dimethyl-8-(Prop-1-En-2-Yl) octahydro-2h-Quinolizinium
PDB code: 4kwd(A).


 
12. Ligand: JF4 × 1
(3r,5s,6r,9ar)-6,9a-Dimethyl-3-(Prop-1-En-2-Yl) octahydro-2h-Quinolizinium
PDB code: 4kvw(A).


 
13. Ligand: PO4 × 1
Phosphate ion
PDB code: 5in8(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 4kvd(A).


 
2. Ligand: BME × 3
Beta-Mercaptoethanol
PDB codes: 2e4o(A), 2oa6(A), 3bnx(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 4
glycerin
Glycerol
PDB codes: 5imi(A), 5imn(A), 5imp(A), 5in8(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 5in8(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 5ivg(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: BME × 1
Beta-Mercaptoethanol
PDB code: 2e4o(A).

 

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