Ligand clusters for UniProt code Q9T0N8

Ligand clusters for Q9T0N8: Cytokinin dehydrogenase 1 from Zea mays

		Top 6 (of 28) ligand clusters Cluster 1. 13 ligand types 33 ligands Cluster 2. 2 ligand types 11 ligands Cluster 3. 2 ligand types 24 ligands Cluster 4. 2 ligand types 2 ligands Cluster 5. 1 ligand type 14 ligands Cluster 6. 1 ligand type 4 ligands
Representative protein: 3s1eA

Structures

PDB		Schematic diagram
3s1eA
2qpmA
3dq0A
3c0pA
1w1sA
		more ...

Cluster 1 contains 13 ligand types

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Ligand		Description
		1. Ligand: ZIP × 1 N-(3-Methylbut-2-En-1-Yl)-9h-Purin-6-Amine PDB code: 1w1q(A).
		2. Ligand: FAD × 12 flavin adenine dinucleotide Flavin-Adenine dinucleotide PDB codes: 1w1o(A), 1w1q(A), 1w1r(A), 1w1s(A), 2qkn(A), 2qpm(A), 3dq0(A), 3kjm(A), 3s1c(A), 3s1d(A), 3s1e(A), 3s1f(A).
		3. Ligand: GOL × 6 glycerin Glycerol PDB codes: 3kjm(A), 3s1c(A), 3s1f(A),
		4. Ligand: ZEA × 1 (2e)-2-Methyl-4-(9h-Purin-6-Ylamino)but-2-En-1-Ol PDB code: 1w1r(A).
		5. Ligand: EMU × 1 N-Benzyl-9h-Purin-6-Amine PDB code: 1w1s(A).
		6. Ligand: 245 × 3 1-(2-Chloropyridin-4-Yl)-3-Phenylurea PDB codes: 2qkn(A), 3kjm(A).
		7. Ligand: ZIP × 2 N-(3-Methylbut-2-En-1-Yl)-9h-Purin-6-Amine PDB codes: 3s1e(A), 3s1f(A).
		8. Ligand: ZIR × 2 N-(3-Methylbut-2-En-1-Yl)adenosine PDB codes: 3s1c(A), 3s1d(A).
		9. Ligand: 15P × 1 Polyethylene glycol (n=34) PDB code: 3s1c(A).
		10. Ligand: 246 × 1 1-Benzyl-3-(2-Chloropyridin-4-Yl)urea PDB code: 2qpm(A).
		11. Ligand: FAD-301 × 1 FAD=Flavin-Adenine dinucleotide, 301=N6-(Penta-2,3-Dienyl)adenine. PDB code: 3bw7(A).
		12. Ligand: FAD-HA8 × 1 FAD=Flavin-Adenine dinucleotide, HA8=N6-(Buta-2,3-Dienyl)adenine. PDB code: 3c0p(A).
		13. Ligand: MZO × 1 N-(3-Methoxyphenyl)-9h-Purin-6-Amine PDB code: 3dq0(A).

Cluster 2 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAG × 1 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB code: 3s1f(A).
		2. Ligand: NAG-NAG × 10 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 1w1o(A), 1w1q(A), 1w1r(A), 1w1s(A), 2qkn(A), 2qpm(A), 3bw7(A), 3c0p(A), 3dq0(A), 3kjm(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAG × 11 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 1w1o(A), 1w1q(A), 1w1r(A), 1w1s(A), 3dq0(A), 3kjm(A), 3s1c(A), 3s1d(A), 3s1e(A), 3s1f(A).
		2. Ligand: NAG-NAG × 13 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 2qkn(A), 2qpm(A), 3bw7(A), 3c0p(A), 3dq0(A), 3kjm(A), 3s1c(A), 3s1e(A), 3s1f(A).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: 15P × 1 Polyethylene glycol (n=34) PDB code: 3s1c(A).
		2. Ligand: PEG × 1 Di(hydroxyethyl)ether PDB code: 3s1d(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: NAG × 14 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 1w1o(A), 1w1q(A), 1w1r(A), 1w1s(A), 2qkn(A), 2qpm(A), 3bw7(A), 3c0p(A), 3dq0(A), 3kjm(A), 3s1c(A), 3s1d(A), 3s1e(A), 3s1f(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: NAG × 4 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 1w1o(A), 1w1q(A), 1w1r(A), 1w1s(A).